Pairwise Alignments

Query, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

Subject, 243 a.a., DNA polymerase III subunit epsilon (NCBI) from Escherichia coli BW25113

 Score =  265 bits (677), Expect = 6e-76
 Identities = 133/237 (56%), Positives = 172/237 (72%), Gaps = 5/237 (2%)

Query: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68
           RQ++LDTETTGMNQ  GA Y GH+IIEIG VEV+NR+LTG +FH Y+ P + +D EA  V
Sbjct: 7   RQIVLDTETTGMNQ-IGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGV 65

Query: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128
           HGI +EF+ DKP FA++A  F+++I GAE+V HNA FD+ FMD+EFSLL    PKT   C
Sbjct: 66  HGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFC 125

Query: 129 QVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTKF 188
           +V DSL +A+ + PG++N+LDALC RY IDNS+R LHGALLDA+ILA+VYL MTGGQT  
Sbjct: 126 KVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSM 185

Query: 189 ELSNEKPGQESGG---IIRLANNRPSLKVIGASADELNMHEQRLDLVE-KSGQCIWR 241
             + E   Q+  G   I R+      L+V+ A+ +E+  HE RLDLV+ K G C+WR
Sbjct: 186 AFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEEIAAHEARLDLVQKKGGSCLWR 242