Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 383 a.a., isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 34/393 (8%)

Query: 124 EEQAFIEGPVEEVCK--MLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEFSA 181
           EEQ  I     +  +  +    Q   + G + +++   + + G   M++ +++GG     
Sbjct: 8   EEQVMIRDMARDFARGEIAPYAQAWEKAGWIDDALVAKMGELGLLGMVVPEEWGGTYVDY 67

Query: 182 YAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCFAL 241
            A +  +++++       + + + NS+G G +L +YGT +Q+  +L  LA G  + CF L
Sbjct: 68  VAYALAVEEISAGDGATGALMSIHNSVGCGPIL-NYGTESQKQTWLADLASGQAIGCFCL 126

Query: 242 TSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDPDK 301
           T P+AGS+A  +     +  G W         +T  K++++    A  L + F + DP+ 
Sbjct: 127 TEPQAGSEAHNLRTRAELRDGHW--------VITGAKQFVSNGKRAK-LAIVFAITDPE- 176

Query: 302 LLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNG-PTRGNEVFVPLDFIIGGPEMA 360
            LG K   GI+  L+PT  PG    R    +     +      N+  VP   ++G     
Sbjct: 177 -LGKK---GISAFLVPTATPGFVVDRTEHKMGIRASDTCAVTLNQCTVPEANLLG---ER 229

Query: 361 GQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMA- 419
           G+G  + +  L  GR I + + + G  + A  A  AYAR R QF   I + + +   +A 
Sbjct: 230 GKGLAIALSNLEGGR-IGIAAQALGIARAAFEAALAYARDRVQFDKAIIEHQSVANLLAD 288

Query: 420 ---RIGGNAYLMDAVTTLTTTGIDLGEKPSVISAI-VKYHLTDRMQKCVIDAMDIHGGKG 475
              ++     L+     L + G     KP +  A   K   ++  +K    AM IHGG G
Sbjct: 289 MQTQLNAARLLILHAARLRSAG-----KPCLSEASQAKLFASEMAEKVCSSAMQIHGGYG 343

Query: 476 VCLGENNYLGRGYQAAPIAITVEGANILTRSMI 508
               E+  + R Y+ A I    EG + + R +I
Sbjct: 344 YL--EDYPVERYYRDARITQIYEGTSEIQRMVI 374