Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 815 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  788 bits (2035), Expect = 0.0
 Identities = 405/807 (50%), Positives = 550/807 (68%), Gaps = 11/807 (1%)

Query: 4   LLWIFVMLFALGALAYLRVSLLTST-IIAAIVMALGT---ATASISPLAWLVFLAITLPL 59
           LLWI V++  +  LA+ RV+ L +  ++A  ++A+G    A   +  + W++   +  PL
Sbjct: 3   LLWILVLVVGIAYLAHRRVAPLPALGVVAVYLLAMGAWSHAPGWLLLIFWVLIALVAAPL 62

Query: 60  NIGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVA 119
            +   R+   T+PL   ++ ++P MS TE++AI+AGT WW+ +LF+G+P+W KL  YP A
Sbjct: 63  LLPDLRRQYFTKPLFSWFQKVLPPMSETERDAIDAGTVWWDGELFSGRPDWDKLLAYPKA 122

Query: 120 RLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEF 179
           +LT EEQAFI+GP EE+C M++  ++   + DLP + W+++K +GFFA+II K+YGG  F
Sbjct: 123 QLTEEEQAFIDGPTEELCAMVSDWEIGQAM-DLPPAAWEHIKTHGFFALIIPKEYGGKGF 181

Query: 180 SAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCF 239
           SAYA S+V  KLA  S +LASTV VPNSLGP ELL HYGT  Q++HYLPRLA+G ++PCF
Sbjct: 182 SAYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTEEQRNHYLPRLARGDDIPCF 241

Query: 240 ALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDP 299
           ALT P AGSDAGA+PD G++CKG+W+G+E LG++L W KRYITL PVAT+LGLAFK  DP
Sbjct: 242 ALTGPLAGSDAGAMPDTGVICKGEWEGKETLGLRLNWEKRYITLGPVATLLGLAFKAHDP 301

Query: 300 DKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEM 359
           D LLG++E+LGI+ ALIPTD PGVE GRRH PL   F NGP  G +VF+PL+F+IGG EM
Sbjct: 302 DHLLGEEEDLGISLALIPTDTPGVEIGRRHLPLGAAFMNGPNAGKDVFIPLEFLIGGQEM 361

Query: 360 AGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMA 419
            G+GW ML+ CLSVGR I+LP+   G  K  ++ TG YA++R QF +P+   EGI+E +A
Sbjct: 362 LGKGWMMLMNCLSVGRSISLPAVGTGAAKFTSLVTGQYAQVREQFNVPLSAFEGIQEALA 421

Query: 420 RIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLG 479
           RIGGNA+LMD+   LT   +DLGEKPSV+SAI+KYHLT+R ++C+  AMD+HGGKG+ +G
Sbjct: 422 RIGGNAWLMDSARMLTANAVDLGEKPSVLSAILKYHLTERGRECISHAMDVHGGKGIIMG 481

Query: 480 ENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLND 539
            NNYLGR +Q API ITVEGANIL+R+++I+GQGAIRCHP+VL EM  A   D  ++L +
Sbjct: 482 PNNYLGRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGRDDHDQALKE 541

Query: 540 FDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAM 599
           FD  L  HIGF  SN   +  L L   +F  +P    ++ Y++ +NR +A  ALL+DL+M
Sbjct: 542 FDGLLMQHIGFAVSNAASTLVLNLGVGHFEKAPGNRLSQGYFRALNRQAAAFALLADLSM 601

Query: 600 ATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQD 659
             LGG LKR+ER+SARLGD+LS +YLASA LKRY D         L  WA+E++L + + 
Sbjct: 602 MLLGGELKRRERLSARLGDVLSHMYLASAALKRYHDLDSPDHLEPLFAWAMEESLGESER 661

Query: 660 SLDDLLNNFP-MGLGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCA--SRDRLGKGQ 716
           +LD+LL+NFP   LG +LRVI+FPFGR    PSD LD +VA ++       + + L  G 
Sbjct: 662 ALDELLSNFPNKVLGCLLRVIVFPFGRRHTGPSDALDAEVAAVIGRAKGDPTLEELLAGC 721

Query: 717 FWTPSPFNAVGIQEQTFKDILACEPLHDKICKA--TGKRHPFMWLDKLAAEGKALGILSD 774
           +   S  + VG  +  +  + A   L  K+  A  +G+  P      + A   A G+L  
Sbjct: 722 YRPQSAEDPVGALQHAYDLLGASHSLQKKLHVALKSGQVKPTAGEHAIDAALHA-GVLQP 780

Query: 775 EEVALLERAEIGRMKSINVDDFDPAEL 801
            E   L   E  R K I+VDDF   EL
Sbjct: 781 AEAHTLREVEAARRKVIDVDDFSKEEL 807