Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 7e-23
 Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 28/362 (7%)

Query: 153 PESIWQYLKDNGFFAMIIKKKYGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGE 212
           PE + +   D G     + ++YGG            + +A VS   A  +   N++    
Sbjct: 37  PEHLIRIFGDMGLMQARVPEEYGGPGLDLTTTCMAKELVARVSMTGAQLIN-QNTISFVL 95

Query: 213 LLQHYGTPAQQDHYLPRLAKGLEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGM 272
            L H+GT  Q+  +LPR+AKG  V   A+T P AGSD GA+    +      +G+  +  
Sbjct: 96  PLLHFGTDEQRRKWLPRVAKGGVVSSVAITEPHAGSDVGAMKTNAV-----REGDHYV-- 148

Query: 273 KLTWNKRYITLAPVATVLGLAFKLQDPDKLLGDKEELGITCALIPTDVPGVETGRRHFPL 332
            +   K +IT+AP+A  + L  K  + ++   D     I+C ++     G+  G      
Sbjct: 149 -VNGQKCFITMAPLADYITLFAKTGEVNRRGVD----NISCFIVDMKSAGITLGGSE--- 200

Query: 333 NCMFQNGPTRGNEVF----VPLDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSAGGIK 388
             M Q G    +  F    VP++  +G     G+G+   +  L + R  T+ +++ G  +
Sbjct: 201 KMMGQRGTPHADIFFDNVRVPVENRMG---EEGRGFISCMHILDLNRP-TVAASAVGVAQ 256

Query: 389 TAAVATGAYARIRRQFKLPIGKLEGIEEPMARIGGNAYLMDAVTTLTTTGIDLG--EKPS 446
            A     AYA+ R+ F   IG+ +G++  +A +        A+    T  ID G  ++ +
Sbjct: 257 GAFDIAVAYAKERKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKCTRAIDAGQHDRLT 316

Query: 447 VISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGENNYLGRGYQAAPIAITVEGANILTRS 506
            ++++VK   TD   K   DA+ + GG G   G  N++ R  + A +    EG N + R 
Sbjct: 317 EMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRG--NHVERMMRDAKVLQIYEGTNQIQRM 374

Query: 507 MI 508
           +I
Sbjct: 375 VI 376