Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 759 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

 Score =  508 bits (1309), Expect = e-148
 Identities = 282/614 (45%), Positives = 384/614 (62%), Gaps = 12/614 (1%)

Query: 67  SVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVARLTAEEQ 126
           ++I R  +K +   +P +  TE+ A+EAGT  +E  LFAG+P++  L      +LT  EQ
Sbjct: 5   TLIGRWAMKPFSKALPPLGDTERAALEAGTVGFEGRLFAGRPDFDVLAAMGPNQLTEREQ 64

Query: 127 AFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEFSAYAQSR 186
           AF++  V  +C ML+ H +  Q  DLP  +W++L++  FF MII +++GGL FS +A + 
Sbjct: 65  AFLDNEVRALCHMLDDHAID-QARDLPPEVWRFLREKRFFGMIIPEEFGGLGFSHFAHAT 123

Query: 187 VLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCFALTSPEA 246
           V+ ++A +++  A TV VPNSLGP ELL  YGT AQ+DHYLPRLA G E+PCF LTSP A
Sbjct: 124 VVTRIATINTATAVTVMVPNSLGPAELLLRYGTDAQKDHYLPRLADGRELPCFGLTSPYA 183

Query: 247 GSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDPDKLLGDK 306
           GSDA +IPD G+V + +++G    G  + ++KRYITLAPVATV+GLAF   D  +  G +
Sbjct: 184 GSDAASIPDRGVVVEREFEGRMTRGFLVDFDKRYITLAPVATVVGLAFHAVDESRPEGQR 243

Query: 307 EELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEMAGQGWRM 366
           E LGITCALIP    G+E GRRH P++  F NGP  G +VFVP+D+IIGG +  GQGWRM
Sbjct: 244 E-LGITCALIPVPHEGMEIGRRHRPMDSAFMNGPIHGRQVFVPMDWIIGGDKQVGQGWRM 302

Query: 367 LVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMARIGGNAY 426
           L+ECL+ GR I+LP+  +   +TA   +  Y +IR QF +P+GK   +   +A++    Y
Sbjct: 303 LMECLAAGRAISLPALGSAMQQTALYVSNGYGQIREQFGMPVGKFHAVAGLVAQMSAELY 362

Query: 427 LMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGENNYLGR 486
             DA    T   +D GE+PSV SAI+K  LT+  ++ V   MDI GGKG+  G +N LG 
Sbjct: 363 ATDAARRFTAAALDKGERPSVASAILKVQLTEAGRRAVNHGMDILGGKGIIYGPSNLLGV 422

Query: 487 GYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLNDFDSALFG 546
            Y+ APIAITVEGANILTR++I++GQGA+RCHP+VL EM A    D          AL  
Sbjct: 423 AYRQAPIAITVEGANILTRALIVFGQGAVRCHPHVLDEMAAVQAGDE----TALGKALMA 478

Query: 547 HIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAMATLGGGL 606
           H     +NL    W  L  +     P +D      + + R SA  AL +DLAM  LGG L
Sbjct: 479 HGRHVATNL----WHSLFGAPVLGEPPEDLLPE-ARLVARMSAKYALTADLAMGMLGGKL 533

Query: 607 KRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQDSLDDLLN 666
           KR E +SARLGD+L+ LYLASA++ RY+ +G   E L   Q A+   L +    L DL  
Sbjct: 534 KRMELLSARLGDVLAHLYLASASIWRYRVDG-APELLPFAQAAIRLQLDEAGKILRDLYA 592

Query: 667 NFPMGLGRVLRVIL 680
           N P    RV+  ++
Sbjct: 593 NLPTAGRRVIGALV 606