Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 383 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Sphingobium sp. HT1-2

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 22/360 (6%)

Query: 150 GDLPESIWQYLKDNGFFAMIIKKKYGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLG 209
           G  P S+++ +   G + M   + YGG E  + + +  L +LA     L++ V + NS+ 
Sbjct: 41  GGYPRSLFEEMAGLGLWGMTAPEAYGGAEADSVSYALALMELAAADGALSTIVSIQNSIL 100

Query: 210 PGELLQHYGTPAQQDHYLPRLAKGLEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEV 269
              LL+  G+  Q+  +LP L  G  +  FALT  +AGSDA A+    +   G W     
Sbjct: 101 VSGLLKD-GSEEQKARFLPDLIGGRTIGAFALTESDAGSDASAVRTRAVKVDGGW----- 154

Query: 270 LGMKLTWNKRYITLAPVATVLGLAFKLQDPDKLLGDKEELGITCALIPTDVPGVETGR-R 328
              ++T  K++IT   +  V+ +   + DPD   G K   G++  L+PTD PG    +  
Sbjct: 155 ---RITGAKQFITSGKIGGVV-MIVAVTDPD--AGKK---GLSVFLVPTDRPGYAVDKVE 205

Query: 329 HFPLNCMFQNGPTRGNEVFVPLDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSAGGIK 388
           H            R +++FV  D +IG P   GQG+   +  L  GR I + +   G  +
Sbjct: 206 HKMGQGASDTCALRFDDMFVEDDLLIGQP---GQGYAQALANLETGR-IGIAAQCVGMAQ 261

Query: 389 TAAVATGAYARIRRQFKLPIGKLEGIEEPMARIGGNAYLMDAVTTLTTTGIDLGEKPSVI 448
            A     AYA+ R+ F   I + + +   +A +         +        D G+     
Sbjct: 262 AALEIAIAYAKDRKSFGKAIIEHQAVGFRLADLATRLEAARQLVLSAAAMKDSGQPALTQ 321

Query: 449 SAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGENNYLGRGYQAAPIAITVEGANILTRSMI 508
           +++ K   ++  +  V  AM   GG G    E   + + Y+   +    EG + + R +I
Sbjct: 322 ASMAKLFASEAAEAVVSGAMQTLGGYGYL--EEFGIAKIYRDVRVCQIYEGTSDIQRMVI 379