Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 36/364 (9%)

Query: 153 PESIWQYLKDNGFFAMIIKKKYGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGE 212
           P+     + + G F M++ +++GG +    A +  L+++A      ++ + V NS+G   
Sbjct: 36  PKEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVP 95

Query: 213 LLQHYGTPAQQDHYLPRLAKGLEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGM 272
           +L+ +G   Q++ +L  LA G  +  FALT P+AGSDA ++       + + +G+  +  
Sbjct: 96  ILR-FGNEQQKEQFLTPLATGAMLGAFALTEPQAGSDASSLK-----TRARLEGDHYV-- 147

Query: 273 KLTWNKRYITLAPVATVLGLAFKLQDPDKLLGDKEELGITCALIPTDVPGVETGR----- 327
            L  +K++IT    A V+ + F + DP     +  + GI+  ++PTD PG +  R     
Sbjct: 148 -LNGSKQFITSGQNAGVV-IVFAVTDP-----EAGKRGISAFIVPTDSPGYQVARVEDKL 200

Query: 328 -RHFPLNC--MFQNGPTRGNEVFVPLDFIIGGPEMAGQGWRMLVECLSVGRGITLPSNSA 384
            +H    C  +F N       V VP+   +G     G+G+++ +  L  GR I + S + 
Sbjct: 201 GQHASDTCQIVFDN-------VQVPVANRLGA---EGEGYKIALANLEGGR-IGIASQAV 249

Query: 385 GGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMARIGGNAYLMDAVTTLTTTGIDLGEK 444
           G  + A      YA  R+ F  P+ + + +   +A +     +   +        D G  
Sbjct: 250 GMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAALRDAGRP 309

Query: 445 PSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGENNYLGRGYQAAPIAITVEGANILT 504
             V +++ K   ++  +K   DA+   GG G     +  L R Y+   +    EG + + 
Sbjct: 310 ALVEASMAKLFASEMAEKVCSDALQTLGGYGYL--SDFPLERIYRDVRVCQIYEGTSDIQ 367

Query: 505 RSMI 508
           R +I
Sbjct: 368 RMVI 371