Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 815 a.a., medium-long chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  770 bits (1988), Expect = 0.0
 Identities = 404/809 (49%), Positives = 547/809 (67%), Gaps = 11/809 (1%)

Query: 4   LLWIFVMLFALGALAYLRVSLLTST-IIAAIVMALGTATASISPLAWLVFLAITLPLNIG 62
           LLW+ V++     L + R++ L    I+AA V+ +G  +++   L  L+++ + L + + 
Sbjct: 3   LLWLVVLVIGAAYLTHRRLAPLQILGIVAAYVLLMGIFSSAPGWLLALIWVVLALKIALV 62

Query: 63  A---FRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKLHNYPVA 119
           A   +R+ + T P+ + ++  +P MS TE+EAI+AGT WW+ +LF+G+P+W+ L  YP  
Sbjct: 63  ALPQWRRKLFTAPVFRWFQRTLPPMSQTEREAIDAGTVWWDGELFSGRPDWRTLLAYPAP 122

Query: 120 RLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKKYGGLEF 179
           +LT EEQAFI+GP E +C M++  Q+   L DLP   W ++K +GFFA+II K+YGG  F
Sbjct: 123 KLTEEEQAFIDGPTEALCAMVSDWQIGQDL-DLPPEAWAHIKQHGFFALIIPKEYGGKGF 181

Query: 180 SAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKGLEVPCF 239
           SAYA S+V  KLA  S +LASTV VPNSLGP ELL HYGT  Q++ YLPRLA+G E+PCF
Sbjct: 182 SAYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTDEQRNRYLPRLARGEEIPCF 241

Query: 240 ALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLAFKLQDP 299
           ALT P AGSDAGA+PD GI+CKGQWQGEEV+G++L W KRYITL PVAT+LGLAFK  DP
Sbjct: 242 ALTGPLAGSDAGAMPDTGIICKGQWQGEEVIGLRLNWEKRYITLGPVATLLGLAFKAYDP 301

Query: 300 DKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFIIGGPEM 359
           D LLG++EELGI+ ALIPTD PGVE G+RH PL   F NGP  G +VFVPLDF+IGG  M
Sbjct: 302 DHLLGEQEELGISLALIPTDTPGVEIGKRHLPLGAAFMNGPNSGKDVFVPLDFLIGGQAM 361

Query: 360 AGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEGIEEPMA 419
            G+GW ML+ CLSVGR I+LP+   G  K  ++ TG YA IR QF +P+   EGI+E +A
Sbjct: 362 LGKGWMMLMNCLSVGRSISLPAVGTGAAKYTSLVTGQYANIREQFNVPLAAFEGIQESLA 421

Query: 420 RIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLG 479
           RIGGNA+LMD+   LT   +DLGEKPSV+SAI+KYHLT+R ++C+  AMD+HGGKG+ +G
Sbjct: 422 RIGGNAWLMDSARLLTAKAVDLGEKPSVLSAILKYHLTERGRECIQHAMDVHGGKGIIMG 481

Query: 480 ENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDMHKSLND 539
            NNYLGR +Q API ITVEGANIL+R+++I+GQGAIRCHP+VL EM  A   D  ++L +
Sbjct: 482 PNNYLGRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGREDHDQALKE 541

Query: 540 FDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDKTKRYYQHMNRFSANLALLSDLAM 599
           FD  L  HI F   N   +   GL    F   P    ++ Y++ +NR +A  A+++DL+M
Sbjct: 542 FDDLLMKHILFAAGNAASTLVYGLGLGRFERVPGDALSQGYFRALNRQAAAFAMMADLSM 601

Query: 600 ATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVEDALYKLQD 659
             LGG LKR+ER+SARLGD+LS LYLASA LKRY D+G       L++WA+E++L + + 
Sbjct: 602 MLLGGALKRRERLSARLGDVLSYLYLASAALKRYHDQGSPEYLQPLLRWAMEESLGQTER 661

Query: 660 SLDDLLNNFP-MGLGRVLRVILFPFGRPLKRPSDVLDHKVAKIM--QTPCASRDRLGKGQ 716
           +LD LL+NFP   +G  LRV++FPFGR  K P D LD +VA+++  +    + + L  G 
Sbjct: 662 ALDRLLDNFPNRFVGCALRVLVFPFGRRHKGPGDELDAEVAELIGRRKGDPALEELLAGC 721

Query: 717 FWTPSPFNAVGIQEQTFKDILACEPLHDKICKAT--GKRHPFMWLDKLAAEGKALGILSD 774
           +   +  + V   ++    +     L   + +A   GK  P      + A  KA G+L  
Sbjct: 722 YRPQAEHDPVADLQRASDLLEDTAQLSKALYQAVKEGKVQPAPGQSGIDAAVKA-GVLQP 780

Query: 775 EEVALLERAEIGRMKSINVDDFDPAELRA 803
           ++   L  AE  R K I+VD FD A+L A
Sbjct: 781 DDGQRLHEAEQARRKVIDVDAFDKAQLLA 809