Pairwise Alignments

Query, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

Subject, 231 a.a., channel protein, hemolysin III family from Kangiella aquimarina DSM 16071

 Score =  183 bits (464), Expect = 3e-51
 Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 1/211 (0%)

Query: 27  TAAPYSRAEELANALSHGLGVIAGILALAFSLHKGWDRLTNLQLGGLALYCLSIILLFLC 86
           T   YS  EE+ANAL+HG+G +  + A+   +          +L    +Y +S+++LF  
Sbjct: 21  TEHTYSIGEEVANALTHGIGALLSVAAMTMMIMTSVQLGDGWKLASSIVYGISLVILFTS 80

Query: 87  STLYHSVSAPKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVEADAILIAIWSLALGGI 146
           STLYHS     +K   +  DHCAIY LIAGTYTP + + L+ V    +   IW LA  G+
Sbjct: 81  STLYHSFQPESIKKVFQTFDHCAIYFLIAGTYTPFVLVSLNGVWGWVLFGIIWGLAFFGV 140

Query: 147 LFKTLFIHRFKIFSLVLYLVMGWLCVIVMKQLLAAMTPLGFQLLLAGGIFYSTGVIFYVG 206
           +FK  F  RF   SL+ Y++MGW+ V+  +++L  +      LL AGG+ Y+ G IFY  
Sbjct: 141 IFKVAFKQRFPRVSLITYILMGWVIVVAAEEMLEKVPAPALWLLFAGGLSYTLGTIFYAA 200

Query: 207 -KRIPYNHAIWHLFVLAGALSHFLCVYLTVI 236
            K+IP+NHAIWHLFVL GA+ HFL VYL VI
Sbjct: 201 DKKIPFNHAIWHLFVLGGAVCHFLAVYLYVI 231