Pairwise Alignments

Query, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella loihica PV-4

Subject, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

 Score =  202 bits (514), Expect = 3e-57
 Identities = 103/207 (49%), Positives = 145/207 (70%), Gaps = 6/207 (2%)

Query: 1   MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL 60
           MIGRLRG L EKQ P ++++  G+GYE+++P+T+ Y LP + +   ++TH VVREDAQLL
Sbjct: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60

Query: 61  YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT 120
           YGFI K++R  FR LI+ NGVGPKLAL ++S +   E V+ V   D + L K+PGVGKKT
Sbjct: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120

Query: 121 AERLLVEMRDKLKSLMEASHGNEREFVLQSNY--TPAPVVNTAEEDAISALLALGYKPAQ 178
           AERLLVE++D+ K    A       F L  N    PA  V +AE DA++AL++LGYKP +
Sbjct: 121 AERLLVELKDRFK----AWEVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQE 176

Query: 179 ASKAVSSVFEEGMDSETLIKASLKSML 205
           ASKAVS++ ++ + +E +I+ +LK M+
Sbjct: 177 ASKAVSAIKDKNLSAEDMIRRALKGMI 203