Pairwise Alignments

Query, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella loihica PV-4

Subject, 205 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 4e-60
 Identities = 110/208 (52%), Positives = 153/208 (73%), Gaps = 8/208 (3%)

Query: 1   MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL 60
           MIGRLRG L EKQ P ++I+  GVGYE+++P+T+ Y LP++ +   ++TH VVREDA LL
Sbjct: 1   MIGRLRGTLAEKQPPHLIIDVNGVGYELEVPMTTLYRLPKVGETVTVHTHLVVREDAHLL 60

Query: 61  YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT 120
           YGF  K+ER LFR LI+ NGVGPKLAL ++SG+   E V+CV+  D + LV++PGVGKKT
Sbjct: 61  YGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALVRVPGVGKKT 120

Query: 121 AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVV--NTAEEDAISALLALGYKPAQ 178
           AERLLVE++D+ K    A   +   F L S+  P PV   ++AE DA+SAL++LGYKP +
Sbjct: 121 AERLLVELKDRFK----AWETSPAMFTLVSD-GPLPVASESSAEADAVSALVSLGYKPQE 175

Query: 179 ASKAVSSVFEE-GMDSETLIKASLKSML 205
           ASKA++++ ++ G+ SE LI+ SLK M+
Sbjct: 176 ASKAIAAIKDKAGLSSEELIRRSLKGMI 203