Pairwise Alignments

Query, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella loihica PV-4

Subject, 203 a.a., Holliday junction DNA helicase motor protein (NCBI) from Escherichia coli BW25113

 Score =  245 bits (625), Expect = 5e-70
 Identities = 125/205 (60%), Positives = 157/205 (76%), Gaps = 2/205 (0%)

Query: 1   MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL 60
           MIGRLRG+++EKQ P VLIE GGVGYEV MP+T FYELPE  QEA+++THFVVREDAQLL
Sbjct: 1   MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60

Query: 61  YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT 120
           YGF  KQER LF+ LIKTNGVGPKLAL ILSGM+A +FV  VE +++  LVKLPG+GKKT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120

Query: 121 AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVVNTAEEDAISALLALGYKPAQAS 180
           AERL+VEM+D+ K L         + VL S  +PA   + AE++A++AL+ALGYKP +AS
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA--TDDAEQEAVAALVALGYKPQEAS 178

Query: 181 KAVSSVFEEGMDSETLIKASLKSML 205
           + VS +      SETLI+ +L++ L
Sbjct: 179 RMVSKIARPDASSETLIREALRAAL 203