Pairwise Alignments

Query, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella loihica PV-4

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Dickeya dianthicola ME23

 Score =  232 bits (592), Expect = 3e-66
 Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 1/205 (0%)

Query: 1   MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL 60
           MIGRLRG+++EKQ P VLIE  GVGYEV MP+T FYELP+L QEAVI+THFVVREDAQLL
Sbjct: 1   MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL 60

Query: 61  YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT 120
           +GF  KQER+LFR LIK NGVGPKLAL ILSGM+A +FV  VE  +I TLVKLPGVGKKT
Sbjct: 61  FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVNAVERQEINTLVKLPGVGKKT 120

Query: 121 AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVVNTAEEDAISALLALGYKPAQAS 180
           AERL+VEM+D+ K L         +  L +     P  +  + +A +AL+ALGYKP +A 
Sbjct: 121 AERLVVEMKDRFKGLNGDLFNAASDISLPAAANAEPEAD-PQAEAEAALVALGYKPQEAG 179

Query: 181 KAVSSVFEEGMDSETLIKASLKSML 205
           + VS+V   G D ETLI+ +L++ L
Sbjct: 180 RMVSNVARPGADCETLIREALRAAL 204