Pairwise Alignments

Query, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 893 a.a., Outer membrane receptor proteins, mostly Fe transport from Kangiella aquimarina DSM 16071

 Score =  266 bits (679), Expect = 5e-75
 Identities = 263/940 (27%), Positives = 412/940 (43%), Gaps = 151/940 (16%)

Query: 1   MIKTSRLAAAVKLSLIATVSTSGYFVANNAVAAEESAS-FERIAVTGSRIQRQDMETASP 59
           M   + +A AVK +L +  + S    A  + AAEE A   E + VTGSR++R D+E A P
Sbjct: 1   MTNKTMIAKAVKYALYSGFAASMAVAAPASFAAEEEAEEAETVVVTGSRLKRTDVEGALP 60

Query: 60  VTVIDASAIRAEGYNSVDEILQAQPAMAGMAVGSTTNNGADGVAQVDLRGMGASRTLVLL 119
           VTVI    +   G  SV + L+     +  +    + + A   A++ LRG+G  R+L+L+
Sbjct: 61  VTVISREDLDMSGDVSVADFLRNTTFNSFGSFRPQSGSSAQSFAELSLRGLGGGRSLILI 120

Query: 120 NGRRMVNSGSGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGF 179
           +GRR   +     SA DLN+IP+A + R+EIL DGASA+YG+DAI GVVNIIT+KDF+G 
Sbjct: 121 DGRRGPVAPQ-VGSAQDLNSIPLAAVERIEILSDGASAIYGTDAIGGVVNIITRKDFDGV 179

Query: 180 QLDINGGATDKGDGENVEISALYGFNTDGGNYTFGVAYSDRGGVMQKDRDWVEKGASSF- 238
           +  I      +  G   E S ++G + D G+   G +++ R  V Q+DR+W   G SS+ 
Sbjct: 180 EFRIGASEPSREGGSTDEGSIIFGASGDRGSAYLGASWNSREIVFQRDREWSSGGISSYG 239

Query: 239 ------IPTGSLGGKVQDENGNWVDRTEG----------------YDFTQDSWLQTPNER 276
                   T +  G    +  NW    EG                YDFT  +  +   E 
Sbjct: 240 NNYQSLATTTAFTGLSGVQ--NWTPNGEGCDSVGMFTIPGQNLCFYDFTALAADEAELEN 297

Query: 277 YSFFANATQEFANEIVFTGDLLYTKRQSEQMMAAQPASVMLDVCTPTSTGNCITLTDEMV 336
           +S F  A  +  ++        +    S      + A   L V  P S+ N     D ++
Sbjct: 298 HSIFGRAQYQINDD----WSTFFNATNSRVKSFGRYAPTPLIVFVPASSPNNYVGEDVLL 353

Query: 337 AGGITPDDQGRVEYRRRTTDAGNRIYEQDTDTLRVSAGLAG--------EFDVHTGIAWD 388
                         R R+   G R    D +   V  G  G        EF +      D
Sbjct: 354 --------------RHRSLGTGTRDTNTDQNMYAVEWGFEGFVTDAVEMEFGIRRN---D 396

Query: 389 LSY-TYGKNKAETWVHNSINAKNMAQSVYDNQDAWFSGDPLSQAIVDDISYLESTTGGNE 447
             Y  +G+N   T + N    + +A   YD  D   +G+P S      ++ L++T     
Sbjct: 397 YKYDEFGRNYVVTPLMN----QAIADGSYDILDP--AGNPDSV-----LNGLKATINRES 445

Query: 448 QHIVSGVISG---EAFDLEAGPVAYAIGAEYRHDSGYYNPDPVIVAGEGTAAQQDPTDGS 504
             I+  V      + FD++ G     +G EYR +      D +   G    +  +   G 
Sbjct: 446 SSIIDEVYVNSQFDLFDMDGGAARMLVGGEYRKEKYEDQYDSLSEGGVIGGSAGNSAGGG 505

Query: 505 YSVVSVYQEVSVPFTDKLTGEFALRFDDYSTFGNASTWKIGLTYEATDDLMLRAVAATGF 564
             V +VY E  +P  D L    A R+DDYS FG+    K+ + ++ TDD+ +RA    GF
Sbjct: 506 RDVTAVYFETLLPVLDNLEVNVAGRYDDYSDFGDNFAPKVSVRFQPTDDVTMRASWGEGF 565

Query: 565 RAPNVSELFGGNVGSYDYLDDP-----------WGNEQDPQILVNYTSDPDLKAESSESY 613
           RAP++  L      S D   DP              + D  +L N    P+L AE+S+ +
Sbjct: 566 RAPSLDILTAQPAFSADGTTDPETCLFLSGSISCQTQTDAYVLAN----PNLGAENSDQF 621

Query: 614 TAGLVYSPSYIDGMSLTLDYWRFKIKDAISRLDV------QAGLNACHAGDT-------- 659
             G+V+  +  D +S+++DY+  +++D IS +          GL  C  G +        
Sbjct: 622 GFGVVWQAT--DDLSMSVDYYNIQLEDQISAIGTGEIVACLRGLAPCPNGVSELPATATP 679

Query: 660 --------TACETFGITPDGN--LE--NLTNPL-------TNVGYQDTSGIDFNLAYRFE 700
                    A +T     DGN  +E     NP+        N G  +TSG+DFN+ +R++
Sbjct: 680 GDASLGLGAAFQTVPYDVDGNGTIEPGEEINPILFVQRGFINRGEIETSGLDFNVKHRYD 739

Query: 701 --GLGLDWSISNDLTYLLEFEQDGIDYTGTIGGMFGGYAKVKNNFSVKAGQGDWSLMYSN 758
             G G+  S +  + Y+ ++E +G D+ G + G+    A + N +S+    GD+ ++++ 
Sbjct: 740 MGGAGV-LSTNLQVGYVEKYELNGEDFVG-LPGVPDMRANLSNVWSI----GDFGVVWNI 793

Query: 759 RFIGE-----------------MDDINYGDTV----DSVLYHNISGMYHINDSITASLGV 797
             I E                 + D++Y  TV     S   H++   Y+       SLG 
Sbjct: 794 NHIAETKSTNGTFCEDFSDPSCIPDVSYDTTVRLQNPSWTTHDLQVNYNTPWDGMISLGA 853

Query: 798 KNFTDEKPVM-VASGNEAGTVPEVYDTIGRQIYGGVTVKF 836
            N TDE PV+    G   G    +YD  GR +Y   T +F
Sbjct: 854 NNITDEDPVLDPYEGGGRGYDFGLYDGYGRIVYLRYTQRF 893