Pairwise Alignments

Query, 395 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

Subject, 350 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 48/370 (12%)

Query: 4   VKQFVLPIAVLVLGGGTFAVLASMKKPPEEKPVVDNTPVVAVEIIDKEPMTFTVNSYGIV 63
           +K+ +  +AVLV  G     L + KK       +  T  +A    +  P+  T    G V
Sbjct: 1   MKKIIYIVAVLVALGAIGYTLMNNKKE------MAATAAIAERKSESIPVALTTPKVGAV 54

Query: 64  NAKY----------ETDLVSQVTGEIVYLSDAFVRGGFVKKGQILAKIDPSDYEAALIDA 113
           +  +          +  L+S+  G+++ +      G  VK G++LA++D     A L+ A
Sbjct: 55  DKSFTAQGNFIPEQDLTLLSETQGQVLKIYKQ--NGDRVKAGEMLAQVDAQLLRAELVRA 112

Query: 114 KATVASAKATLVQEKAYGKVAAEEWKRIENGTPTELSLRKPQLAQEVARLNSSEAGLKRA 173
           +A    +K  L           E ++ +  G     ++ K QL       +++EA L  A
Sbjct: 113 QANYTKSKRDL-----------ERFENLAEGD----AITKRQLEDARLGFSNAEAALITA 157

Query: 174 TRNLERTVIKAPYDALIESRHIGLGSYVSAGTQVGKLLSTEKAEIRLPLPDKEIRYLDNK 233
            + L    IKAP    I  + I +GSY+S GT++  +++ +  ++ + +P+ ++  + + 
Sbjct: 158 KKRLADASIKAPISGRINEKFIEVGSYLSPGTKLFNIVNVDNLKMNVKVPESQVGLIRD- 216

Query: 234 GLGAQVMVKGNFAGENTSWKGQIVRSEGVIDNRSRMTYLV-AEVIDPYGLKDNKQPLRYG 292
             G +V +K +  G  T ++G +       DN   + Y V  +V +P    DN  PL+ G
Sbjct: 217 --GQKVQIKADAVGGET-FEGTVKAIAAKGDN--SLNYNVELQVSNP---SDN--PLKAG 266

Query: 293 SYITAQIHGSQAQDVTTIARHLVVN--DKVAIMTPENTLAF-KSVDILRQQGTQVVIGDG 349
            Y TA    +  +    I R  +V       +    N  AF K + +   QG +V +  G
Sbjct: 267 MYGTAYFEVADQRKALLIEREAIVGSLQNPQVFVVNNGSAFLKDIKVGGTQGNKVEVTGG 326

Query: 350 LDDGMRLITS 359
           L+ G +++ S
Sbjct: 327 LEAGDKVVQS 336