Pairwise Alignments

Query, 395 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 87/375 (23%), Positives = 156/375 (41%), Gaps = 46/375 (12%)

Query: 8   VLPIAVLVL-----GGGTFAVLASMKKPPEEKPVVDNTPVVAVEIIDKEPMTFTVNSYGI 62
           V+ IAV+ L     GG T        K P+  P       V V  +  E +   +N  G 
Sbjct: 14  VVVIAVIFLFPRLQGGDTSK---EPSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGN 70

Query: 63  VNAKYETDLVSQVTGEIVYLSDAFVRGGFVKKGQILAKIDPSDYEAALIDAKATVASAKA 122
           V +     L +++TG +  ++  F  G FVKKG  L  ++  +  A L   + T    + 
Sbjct: 71  VLSNESVSLRAEITGLVESIN--FEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEG 128

Query: 123 TLVQEK---AYGKVAAEEWKRIENGTPTELSLRKPQLAQEVARLNSSEAGLKRATRNLER 179
              ++K   A   ++ EE+  I N   T LS                   +K     L++
Sbjct: 129 QESRQKQLLAREAISQEEYDIILNQYNTTLS------------------DIKLVKAQLDK 170

Query: 180 TVIKAPYDALIESRHIGLGSYVSAGTQVGKLLSTEKAEIRLPLPDKEIRYLDNKGLGAQV 239
           TVIKAP+D ++  R I  GS +S    +  +++ +  +I   +P+   RY     +G+ +
Sbjct: 171 TVIKAPFDGVLGLRQISAGSVISTTDIIANIVNIDPIKIEFSIPE---RYASQVQVGSTI 227

Query: 240 MVKGNFAGENTSWKGQIVRSEGVIDNRSRMTYLVAEVIDPYGLKDNKQPLRYGSYITAQI 299
               N    +   KG++   E VID  +R   L    I P    +  +    G ++  + 
Sbjct: 228 EFSNN--ASHGLKKGKVYAYEPVIDANTRT--LTLRAISP----NEDRKFLPGMFVNIRF 279

Query: 300 HGSQAQDVTTIARHLVVND----KVAIMTPENTLAFKSVDILRQQGTQVVIGDGLDDGMR 355
           +    +D   +    ++ +    K+ ++  E  +  + V I  +  ++V I DGL  G  
Sbjct: 280 NLEVEEDALLVPSQSLIPELNGYKLFLVNQEGIVQERQVQIGIRTDSEVQILDGLSPGEM 339

Query: 356 LITSALDYPIEGMKL 370
           ++T+ +    EGMK+
Sbjct: 340 VLTTGVLQAKEGMKV 354