Pairwise Alignments

Query, 230 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 231 a.a., Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 8/217 (3%)

Query: 9   AFLVGLMGAGHCIGMCGGLVGAFSQQLPRKASDNILLGQLQFILSYNLGRILSYTLAGAL 68
           A L+GL G  HC  MCG    A  + +P   +    +       +++LGRI SY  AGA+
Sbjct: 9   ALLMGLAGGPHCAAMCGAASSAVIRIVPLPVAGRGAVAGFGAPGAFHLGRIASYAAAGAV 68

Query: 69  VGGSASLLSTLFSIDAYLIGMRVFAGVMMIVTGLYIAQIWSGVVQIERVGKLLWRFIGPI 128
              SA  L+   +  + L  + V   V +   G  +A      +   R+G+ L   + P 
Sbjct: 69  AAASADSLALASTQVSALRPLWVLLHVFVFAWGAMLAVTGRQPLWARRIGRALESRLRPH 128

Query: 129 AN-KWLPITDLKQAFTAGLLWGWLPCGLVYSTLTWAVAANSAQQGAMIMAAFGLGTLPA- 186
           A   WL +         GLLW  LPCG++YS L  A   N   QG ++MA F +G+  + 
Sbjct: 129 AGGTWLGV------LATGLLWVGLPCGMLYSALMLASLGNGPMQGGLLMALFAVGSSASL 182

Query: 187 LVSVGIAARYFAQLVQARKVRLISGLILVSFGIHTLY 223
           L+   I  R     V+      ++G++L +   H ++
Sbjct: 183 LIGPWIWLRLAGDGVRQAWGARLAGVLLAAAAAHAVW 219