Pairwise Alignments

Query, 800 a.a., putative ATP-dependent protease La-relatedprotein (RefSeq) from Shewanella loihica PV-4

Subject, 569 a.a., ATP-dependent protease (RefSeq) from Shewanella loihica PV-4

 Score =  285 bits (730), Expect = 4e-81
 Identities = 158/376 (42%), Positives = 232/376 (61%), Gaps = 5/376 (1%)

Query: 413 AIPLDVKIILFGDYQTYQLLQHYDPEFKELFRVTADFEDEMPRTDASEVQYAKFISSIVV 472
           AIPL  KIIL G    Y +    +  F   F +  +  DE+   + SE+ Y  ++  +  
Sbjct: 177 AIPLHSKIILVGSSTLYSVSYLEERNFPAAFSLLGELVDEIDLNEFSELDYGNYLVELAE 236

Query: 473 GNKMLHCDRGAIKRIIEFSARQADAQNKLSLHSADIANLLRESNYVARTSKSNMIRAGHV 532
            N+ L  ++ A+  +  +S+R A+ Q  LSL +  I+ L+ ++   A   KS  +   ++
Sbjct: 237 ANQ-LTLEQSALAPLFNYSSRLAEHQRHLSLETLGISQLMVQA---ALYGKSKQLNGENI 292

Query: 533 EQALHNHELRVCRLRDYVMQSFINGTTLIDTQDSVVGQINALSVVATSDHQFGAPSRITA 592
             AL  H+ R    +    QSF +    + TQ +++GQIN L+V+  +++ +G P+RITA
Sbjct: 293 AIALARHKTRHNASQSLSAQSFDDNFINLPTQGAMIGQINGLTVLDAAEYTYGEPARITA 352

Query: 593 SVSLGEGAVFDIERKVELGGQIHSKGVMILTAYLATIFGQTDKIPLTTHLTFEQNYSGVD 652
           +V  G+G V DIERK ELGG IH+KG+MILT+ L  IFG+   + L  ++ FEQ+Y  +D
Sbjct: 353 AVHYGDGEVADIERKSELGGNIHAKGLMILTSCLYRIFGKDAPLHLNANIVFEQSYQEID 412

Query: 653 GDSASMAELCAIVSAFAKVPLRQDVAITGSMNQFGQAQPIGGVNEKIEGFFDVCKIKGRH 712
           GDSAS+AE CA++SA A+ P+ Q +A TG+++QFGQ Q IGGVNEKIEGFFD+C+ +G  
Sbjct: 413 GDSASLAEYCALMSAIAEQPIEQGIAATGAIDQFGQVQAIGGVNEKIEGFFDLCQRRGLT 472

Query: 713 KGQGVIIPRTNVQNLMLRADIVDAVNKGEFSIWAIEHVDQAVEILTGIPAGERDFEFEDY 772
             QGVIIP +NVQ L L   ++ AV   EF ++ +EH DQAV IL   PAG RD +   +
Sbjct: 473 GTQGVIIPASNVQQLNLAPAVIAAVKAKEFHLYQVEHTDQAVAILMNKPAGSRD-DNGQF 531

Query: 773 PKESLYALADARLQKL 788
           P+ESLY +  ARL+ L
Sbjct: 532 PEESLYGMVQARLEGL 547