Pairwise Alignments

Query, 555 a.a., 30S ribosomal protein S1 (RefSeq) from Shewanella loihica PV-4

Subject, 576 a.a., 30S ribosomal protein S1 from Pseudomonas putida KT2440

 Score =  803 bits (2073), Expect = 0.0
 Identities = 397/553 (71%), Positives = 464/553 (83%)

Query: 1   MTESFADLFEQSLQQLEFRPGSIVRGTVVSIQNGMVLVDAGLKSESPIPADQFKNAQGVL 60
           M+ESFA+LFE+SL+ L  +PG+I+ G VV I    V V AGLKSE  IP +QF N  G L
Sbjct: 19  MSESFAELFEESLKTLNLQPGAIITGIVVDIDGDWVTVHAGLKSEGVIPLEQFYNEAGEL 78

Query: 61  EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGVINGKVKGGF 120
            I VGDEV VALD+VEDGFGET+LSREKAKR E WIVLE A+   E V GVINGKVKGGF
Sbjct: 79  TIKVGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGF 138

Query: 121 TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA 180
           TV++NGIRAFLPGSLVDVRPVRDT HLE KELEFKVIKLDQKRNNVVVSRR+V+E+E+SA
Sbjct: 139 TVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSA 198

Query: 181 ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ER+ALLE LQEGQ VKGIVKNLTDYGAFVDLGG+DGLLHITDMAWKR+KHPSEIVNVGDE
Sbjct: 199 EREALLETLQEGQQVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEIVNVGDE 258

Query: 241 INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV 300
           ++V+VLK+DRER RVSLGLKQ+GEDPW+ I+ RYPE T++  RVTNLTDYGCF E+EEGV
Sbjct: 259 VDVRVLKFDRERNRVSLGLKQMGEDPWVAITARYPEGTRVQARVTNLTDYGCFAELEEGV 318

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFAER 360
           EGLVHVSEMDWTNKNIHPSKVV +GDEVEV+VLDIDEERRRISLG+KQCK+NPW+DF+ +
Sbjct: 319 EGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQ 378

Query: 361 YAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVSDYKKGDEISAVVL 420
           + KGDK+TG IKSITDFGIFIGLDGGIDGLVHLSDISWN TGEEAV  +KKGDE+  V+L
Sbjct: 379 FNKGDKITGTIKSITDFGIFIGLDGGIDGLVHLSDISWNETGEEAVRRFKKGDELETVIL 438

Query: 421 SVDPERERISLGVKQTEDDPFNAYLADKKKGAIVTGTVTAVDAKGVTIELAETVEGYLRV 480
           SVDPERERISLG+KQ EDDPF+ ++A   KGAIV G V  VDAKG  + LA+ +E  L+ 
Sbjct: 439 SVDPERERISLGIKQLEDDPFSNFVAVNDKGAIVKGIVKEVDAKGAIVTLADDIEATLKA 498

Query: 481 SDISRERIEDASTVYSVGDTVESKFMGVDRKNRSISLSIRAKDEADEKEAMANLNKQDDV 540
           S+ISR+R+EDA  V   G+ +E+K + VDRK+R ISLSI++KD+A+E+EA+ +L    + 
Sbjct: 499 SEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDDAEEREAIQSLKNAPEA 558

Query: 541 AMSNAMAEAFKAA 553
           A    MA   + A
Sbjct: 559 AADTTMAALLREA 571