Pairwise Alignments

Query, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 253 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Acinetobacter radioresistens SK82

 Score =  162 bits (411), Expect = 5e-45
 Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 9/239 (3%)

Query: 5   LLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVEAFGG 64
           ++IPARY SSR PGKPL  I+G+PMI  V ++A   +G   + VATDD RI E       
Sbjct: 4   IVIPARYASSRLPGKPLLEIHGRPMILRVVDQARKVQGFDDLCVATDDERIAEVCRDENV 63

Query: 65  KVVMTDANAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIITLFERHPGEF 124
            VV+T ++  SGTDR+ +     G   DD+++N+QGD+PL+    ++Q+  L    P + 
Sbjct: 64  DVVLTRSDHPSGTDRLSEVARIKGWGSDDIIVNIQGDEPLLPAQLVQQVAQLLIDQP-QC 122

Query: 125 GMATLGYEITEEHELNDPKHVKMVFDNQFNALYFSRARIPFGRDTDDYPV-------YKH 177
            M+TL   I E  E      VK+V      ALYFSRA IP+ RD     +       ++H
Sbjct: 123 SMSTLCEPIHELDEFQRDSIVKVVKSLHGEALYFSRATIPYDRDAARQTIPQLHTQAFRH 182

Query: 178 LGVYAYTREFVRTFNKLPLGRLEDLEKLEQLRALEHGHTIKVAISAFD-SPEVDTPEDI 235
           LG+YAY    ++ +    +G LE LE LEQLR LE+GH I +A++  +  P VDT  D+
Sbjct: 183 LGLYAYRVSLLQAYVGWDMGPLEKLESLEQLRVLENGHRIAIAVAMANLPPGVDTQADL 241