Pairwise Alignments

Query, 366 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 357 a.a., putative Transporter from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 2e-34
 Identities = 91/325 (28%), Positives = 178/325 (54%), Gaps = 13/325 (4%)

Query: 28  IALIIYFAGGLLAPLLVALVLAFLLEWPVAQMVKIGINRTTGASLVLVLFVGVMLLITFG 87
           IA+++Y    +L P LV ++LA+L +  V ++ ++G++RT G  +V  LF  ++L +   
Sbjct: 16  IAVLLYSLHNILTPFLVGIMLAYLADPLVDRLERLGLSRTWGVVVVFGLFTLLLLALLLV 75

Query: 88  LVPSIWRQGVALVTDLPTMLD----KGFITLKGFVEQYPQFLSVEQLDASVGELKKLLDT 143
           LVP + +Q V L    P MLD         ++G +     F   +++ A++G    +  T
Sbjct: 76  LVPMLAKQLVRLYELAPQMLDWLEHVALPWVQGRLGLADGFWKFDKIKAAIG--AHMGQT 133

Query: 144 QHILD-LGKQLIGYSASLLVLMVYAILVPLLVFFFLKDKDELVRGSKRFIPANRD-LARK 201
             I+  L  Q    S +L+  +   +L+P++ F+ L+D D ++   +  +P  R+     
Sbjct: 134 TDIVGMLLSQATASSLALVAWLANMVLIPVVGFYLLRDWDLMMGKLRGLLPRQREPQVMG 193

Query: 202 VWLEMNQQIFNYIRGKVIEIVIIGAASYIFFAIMDLRYAALLGVLTGFSVLIPYVGATLV 261
           +  E ++ +  ++RG+++ ++ +G        ++ L    L+G+L G + ++PY+G  ++
Sbjct: 194 LAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAIVPYMG-FII 252

Query: 262 TLPIALVA-FFQWG--ISPEFGYLMLGYGIIQALDGNLLVPILFSDAVDLHPVFIIAAVL 318
            +  ALVA  FQ+G  + P  G + + + + QAL+G +L P+L  D + LHPV +I A+L
Sbjct: 253 GIGAALVAGLFQFGGDLYPMLGIVAV-FMVGQALEGMVLTPLLVGDRIGLHPVAVIFAIL 311

Query: 319 VFGGLWGVWGVFFAIPLASLVKAVV 343
             G L+G  GV  A+P+A+++  ++
Sbjct: 312 AGGELFGFTGVLLALPVAAVIMVLL 336