Pairwise Alignments

Query, 236 a.a., DNA replication initiation factor (RefSeq) from Shewanella loihica PV-4

Subject, 235 a.a., regulator of DnaA that prevents premature reinitiation of DNA replication from Pseudomonas putida KT2440

 Score =  189 bits (481), Expect = 3e-53
 Identities = 107/231 (46%), Positives = 144/231 (62%), Gaps = 3/231 (1%)

Query: 6   PVQLSLPVYLPDDETFNSYYPAAGNDEL--ILSLQASAEGRANKAVYLWGPVKAGRTHLM 63
           P+QL L V L DD TF +YYP A    L  +  L  +  G     +YLWG    GR+HL+
Sbjct: 4   PIQLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYLWGKQGVGRSHLL 63

Query: 64  HATCARANELNRSSFYLPLGIHASISTELLEGLEQLDLVCIDDVDAIAGHPLWEEALFDL 123
            A   R  +    + YLPL        ELL+ L Q +LVCIDD+  IAG   WEEA+F L
Sbjct: 64  QAATHRFQQRGEPAVYLPLAQLLDRGVELLDYLAQYELVCIDDLHVIAGKADWEEAMFHL 123

Query: 124 YNRVAEHKRCALVVSASATASDAGFALPDLVSRMQWGLTYQLQPMADEEKLAALQRRAAM 183
           +NR+ +  R  L+++ASA+  +    LPDL SR+   L +Q++ ++DE+KL ALQ RA+ 
Sbjct: 124 FNRLRDSGR-RLLLAASASPRELPIKLPDLKSRLTLALVFQMRGLSDEDKLRALQLRASR 182

Query: 184 RGLQLPEDVGRFLLNRLARDLRTLFDVLDRLDKASLVHQRKLTIPFVKEML 234
           RGL L ++VG F+L R AR +  LFD+L+RLD+ASL  QRKLTIPF+KE L
Sbjct: 183 RGLHLTDEVGHFILTRGARSMSALFDLLERLDQASLQAQRKLTIPFLKETL 233