Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 314 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  129 bits (325), Expect = 7e-35
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 5/266 (1%)

Query: 9   LSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEILG--HA 66
           L K++G    ++D++ E++ G+ + ++GPNGAGKTT   +  G   P  G +  LG    
Sbjct: 17  LRKRYGETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGEISALGLQMP 76

Query: 67  PGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALVDLAEVA 126
             + A+  ++  + Q   LDP+ + A  L ++ +  GF  A  R    ++L    L+  A
Sbjct: 77  RDALAIKAQLGVVSQFDTLDPDFSCAENLVVYGRYFGFGKAQVRARVPQLLEFAALSHKA 136

Query: 127 AQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRA--QIGKTTF 184
             KP  LS GM +R+S+A+AL+  P+L+LLDEPT GLDP     + E ++   Q GK + 
Sbjct: 137 DAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERLQVLLQQGK-SI 195

Query: 185 VISSHNLAELEKLCDKVLYLDKGVLNQSISIQDELADEYLTLTMQSCDDEALMAALEALP 244
           ++++H + E E+LC ++L LD G        +D +A+      ++   + AL  A  A  
Sbjct: 196 LLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAEHLEPDVVEVYGNGALSLAESAEL 255

Query: 245 QVISVKSSQSKEFVIHYQVTASFALE 270
           + ++ +   S E V  Y   A   LE
Sbjct: 256 KAMAARVEVSGETVFFYTQDARRLLE 281