Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 319 a.a., ABC transporter ATP-binding protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  134 bits (337), Expect = 3e-36
 Identities = 88/262 (33%), Positives = 143/262 (54%), Gaps = 9/262 (3%)

Query: 3   LITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEI 62
           ++    LSK++GS +A++ ++L++  G    L+GPNG+GKTT   ++   IRPT G+   
Sbjct: 24  ILDIHTLSKRYGSIQAVDKLSLQVEKGSIYGLLGPNGSGKTTTLGMVLDVIRPTSGSFSW 83

Query: 63  LGHAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALVDL 122
            G  P S A   +V AL +     P LT    LE+ A+++G    ++      VL LV L
Sbjct: 84  FGQ-PASPATKKRVGALLETPNFYPYLTARRNLEIVAEIKG----ASHSRIAEVLHLVGL 138

Query: 123 AEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVR--AQIG 180
           ++         S GM +R+++A +L+  PE+++LDEPT GLDP     +REL+   A  G
Sbjct: 139 SQRMHTTFKGFSLGMKQRLALASSLLNDPEVLVLDEPTNGLDPEGIAEVRELILKIAAEG 198

Query: 181 KTTFVISSHNLAELEKLCDKVLYLDKGVLNQSISIQDELADEYLTLTMQSCDDEALMAAL 240
           KT  +++SH L E+EK+C  V  L KGVL     +   LA +   L + + D   ++ AL
Sbjct: 199 KTV-ILASHLLDEVEKVCTHVAVLQKGVLRAQGPVSTVLAAKD-QLVISAGDVPQVLEAL 256

Query: 241 EALPQVISVKSSQSKEFVIHYQ 262
             LP V + + ++  + ++  Q
Sbjct: 257 RQLPFVEAFQQAERGQVLLTLQ 278