Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 304 a.a., gliding motility-associated ABC transporter ATP-binding subunit GldA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  147 bits (370), Expect = 4e-40
 Identities = 95/304 (31%), Positives = 163/304 (53%), Gaps = 13/304 (4%)

Query: 4   ITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEIL 63
           +  K LSK +G +RA++DI+  +  GQ +  +GPNGAGK+T   +   Y+ P+ G V + 
Sbjct: 3   VEVKNLSKVYGGQRAVDDISFTVERGQILGFLGPNGAGKSTTMKVATCYLPPSAGTVLVA 62

Query: 64  GH--APGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALVD 121
           GH       A+   V  LP+   L  ++ +   L+  A + G     AR   Q ++ L  
Sbjct: 63  GHDVVQEPIAVRRSVGYLPEHNPLYLDMYVHEYLQFVASVYGLKGKFARARVQEMVELCG 122

Query: 122 LAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQIGK 181
           L     +K  +LS G  +RV +AQAL+  P++++LDEPT GLDP     IR L++     
Sbjct: 123 LTLEQGKKIGALSKGYRQRVGLAQALVHDPQVLILDEPTTGLDPNQIVEIRSLIKRIGQD 182

Query: 182 TTFVISSHNLAELEKLCDKVLYLDKG--VLNQSI-SIQDELADEYLTLTMQSCDDEALMA 238
            T + S+H + E+  +CD+V+ +++G  V N  + S+Q    DE +TL       EA  A
Sbjct: 183 KTVIFSTHIMQEVAAICDRVVIINRGKLVANSDVASLQTAGRDEKVTLVEFEAPIEA--A 240

Query: 239 ALEALPQVISVKSSQSKEFVIHYQVTASFA--LETELFALFNRQDWRYRAIQRGRTLEDK 296
           AL+A+P V+ V+ +Q+      Y++T+S A  + + +F +   ++W    +++     ++
Sbjct: 241 ALQAIPGVLRVELAQNHT----YRITSSKAADVRSNVFRIAAERNWPLVGLRQEENSLEQ 296

Query: 297 LFSQ 300
           +F Q
Sbjct: 297 IFQQ 300