Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 299 a.a., ABC-type uncharacterized transport system, ATPase component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  123 bits (308), Expect = 6e-33
 Identities = 74/236 (31%), Positives = 130/236 (55%), Gaps = 5/236 (2%)

Query: 1   MKLITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAV 60
           M ++    L+K++G + AL D++L +  G    L+GPNGAGKTTL  ++   I    G+V
Sbjct: 1   MDILKIDGLNKRYGEQAALTDVDLVVPKGGVFGLLGPNGAGKTTLIRIINQIIDGDSGSV 60

Query: 61  EILGHAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120
            + G  P S   +  +  LP++  L   + +  QL  FA+L+G N   AR +    L  +
Sbjct: 61  FLKGE-PLSPKHIKNIGYLPEERGLYKRMKVGDQLIYFARLKGLNGHDARTKVAGWLKKL 119

Query: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIR-ELVRAQI 179
           D+   + +K   LS GM+++V     +I  PE+++LDEP +G DP NA+ I+ E++  + 
Sbjct: 120 DIQAWSEKKIEDLSKGMAQKVQFIATVIHDPEILILDEPFSGFDPVNAEVIKNEMLELKE 179

Query: 180 GKTTFVISSHNLAELEKLCDKVLYLDKG--VLNQSIS-IQDELADEYLTLTMQSCD 232
             TT ++S+H +  ++ LCD +  ++K   VL+  ++ I+D+       + +Q  D
Sbjct: 180 KGTTVMLSTHRMESVDLLCDHIAMINKSRKVLDGPLAQIKDQSRSNIYKVKLQGTD 235