Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 305 a.a., gliding motility-associated ABC transporter ATP-binding subunit GldA from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  125 bits (314), Expect = 1e-33
 Identities = 77/248 (31%), Positives = 133/248 (53%), Gaps = 11/248 (4%)

Query: 7   KALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEG-----AVE 61
           K LSK +G +RAL +++     GQ +  +GPNGAGK+T   +  GY+ P  G      V 
Sbjct: 6   KELSKYYGQQRALKEVSFTAEKGQVLGFLGPNGAGKSTTMKIAAGYLLPDGGDVLVNGVS 65

Query: 62  ILGHAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALVD 121
           ++ H    + ++G    LP+   L   + +   L   A L       A+     V+    
Sbjct: 66  VMDHPQEVSKMIGY---LPEHNPLYLEMYVREFLSFMAGLYQLKGKKAKARIDGVVEACG 122

Query: 122 LAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQIGK 181
           L +   +K  +LS G  +RV +A+AL+  P +++LDEPT+GLDP     IR+L+++   +
Sbjct: 123 LGDEQHKKIGALSKGYRQRVGLAKALVHDPAVIILDEPTSGLDPNQLVDIRKLIKSISAE 182

Query: 182 TTFVISSHNLAELEKLCDKVLYLDKG-VLNQSI--SIQDELADEYLTLTMQSCDDEALMA 238
            T V+S+H + E+E LC+KV+ + +G V++Q +  +++ + ++  L L  Q    E   A
Sbjct: 183 KTLVLSTHVMQEVEALCEKVVIIHQGNVVSQDLLANLKSDNSEMVLYLETQERLREEWFA 242

Query: 239 ALEALPQV 246
           A+E L ++
Sbjct: 243 AMEGLGEL 250