Pairwise Alignments

Query, 304 a.a., DNA polymerase III, delta prime subunit (RefSeq) from Shewanella loihica PV-4

Subject, 329 a.a., DNA polymerase III subunit delta' from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 2e-38
 Identities = 82/173 (47%), Positives = 100/173 (57%), Gaps = 5/173 (2%)

Query: 4   PWLTPVCEAFCSQLISGQQGHAYLLGIHQGYGGMQLANTLAQASLCMAPRAIGACGVCKS 63
           PW   + +    +    Q  HAYLL    G G   LA  L  + LC  P  + ACG CKS
Sbjct: 6   PWQDSLWQQLAGR---AQHAHAYLLHGPVGIGKRDLAERLMASLLCQRPVNLEACGECKS 62

Query: 64  CQLFIAGNHPDCYQLEAD--GNQIKVDQVRELCQKLTATAQQGGRRVAVIKNCERLNTAA 121
           C L  AG+HPD Y LE +     IKVDQVR+L   +  TAQ GGR+V +I+  E +N  A
Sbjct: 63  CLLLKAGSHPDNYLLEPEEADKAIKVDQVRDLVSFVVQTAQMGGRKVVLIEPVEAMNINA 122

Query: 122 ANALLKTLEEPGRETLLLLQSDTPSRLMATISSRCQRLHCQLPSREAVQEWLA 174
           ANALLK+LEEP  +T+LLL S   SRL+ TI SRC +  C LPS     EWLA
Sbjct: 123 ANALLKSLEEPSGDTVLLLVSHQSSRLLPTIRSRCVQQACPLPSEAMSLEWLA 175