Pairwise Alignments

Query, 304 a.a., DNA polymerase III, delta prime subunit (RefSeq) from Shewanella loihica PV-4

Subject, 643 a.a., DNA polymerase III/DNA elongation factor III, tau and gamma subunits from Escherichia coli BL21

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 1/165 (0%)

Query: 9   VCEAFCSQLISGQQGHAYLLGIHQGYGGMQLANTLAQASLCMAPRAIGACGVCKSCQLFI 68
           V  A  + L  G+  HAYL    +G G   +A  LA+   C        CGVC +C+   
Sbjct: 24  VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE 83

Query: 69  AGNHPDCYQLEADGNQIKVDQVRELCQKLTATAQQGGRRVAVIKNCERLNTAAANALLKT 128
            G   D  +++A  ++ KV+  R+L   +     +G  +V +I     L+  + NALLKT
Sbjct: 84  QGRFVDLIEIDA-ASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKT 142

Query: 129 LEEPGRETLLLLQSDTPSRLMATISSRCQRLHCQLPSREAVQEWL 173
           LEEP      LL +  P +L  TI SRC + H +    E ++  L
Sbjct: 143 LEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQL 187