Pairwise Alignments

Query, 512 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

Subject, 516 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 99/445 (22%), Positives = 179/445 (40%), Gaps = 32/445 (7%)

Query: 5   VLNILLLALLAVIPQSITGQIYNSSASQIAASVGLSLDEASWFNTLNTFGLLIALPLGAW 64
           V++++L A +AV+   IT    NSS   I  ++  +L+E SW +T      +I +PL AW
Sbjct: 21  VMSVMLGAFMAVLDIQIT----NSSLKDIQGALSATLEEGSWISTSYLVAEIIMIPLTAW 76

Query: 65  LASRFGYRQLFRIGAVVGLFSTLASSLCMQPAPQMLSWFGHGLSASFLVLFAHAIILKNL 124
           L      R+L    +   L S+L  S+       +L     G +   L+  A  + L  L
Sbjct: 77  LVQLLSARRLAVWVSGGFLLSSLLCSMAWNLESMILFRALQGFTGGALIPLAFTLTLIKL 136

Query: 125 NFRAIAYAESLVLLVAVLVPLGIYPYLLSILAENNLWRWSFSLQLVPFLLMLSWARFG-- 182
                A   ++  + A   P  I P L   L EN  W + F + + P LLM++   +G  
Sbjct: 137 PEHHRAKGMAMFAMTATFAP-SIGPTLGGWLTENWGWEYIFYINIPPGLLMIAGLLYGLE 195

Query: 183 ----HWPHLEETQEIGFNWLQALLLTIASCGIAYILLRGERFDWFETPSIIWITLITASA 238
               HW  L+ T   G      + L +    +   L  G R DW E+  I  + L + + 
Sbjct: 196 KKEAHWELLKSTDYAGI-----VTLGLGLGCLQVFLEEGHRKDWLESHLI--VGLGSVAL 248

Query: 239 ITLLGLAIKNRRGRGQYLDASVLASRIGKLSMLQAAIAGFVVLAISMLTSVYMTKIMQYS 298
           ++L+   I         ++  +L +R   LS + +   G  +     L  +Y+ ++  Y+
Sbjct: 249 VSLITFVILQFSKPHPLINLRILGNRNFGLSSIASLGMGVGLYGSIYLLPLYLAQVQGYN 308

Query: 299 AANAGYINLIGFVGMLAGLGVALFATCNPDRNPFKVVPIGIIMMIATCIWLTGS--NALI 356
           A        IG V M  G+         P     KV+   ++  +  C++   S  + ++
Sbjct: 309 ALQ------IGEVIMWMGIPQLFLIPLVPQL--MKVISPKVLCALGFCLFGAASFGSGVL 360

Query: 357 GQAYLWPAI----LLKGFAIGILNITLTIHILRSLPRQHLLETIAWFYLFRNLGSLSAIG 412
              +  P      +++     ++ +T+++     + +Q      + F + RNLG    I 
Sbjct: 361 NPDFAGPQFNHIQIIRALGQPMIMVTISLIATAYIQQQDAGSASSLFNILRNLGGAIGIA 420

Query: 413 EFSRFMTIETSNAMQKLAENYDPLN 437
             +  +   T      L E+  P N
Sbjct: 421 LLATLLDARTKVYFDYLRESVVPSN 445