Pairwise Alignments

Query, 512 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

Subject, 512 a.a., multidrug efflux system protein from Escherichia coli BL21

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 118/508 (23%), Positives = 211/508 (41%), Gaps = 38/508 (7%)

Query: 6   LNILLLAL-LAVIPQSITGQIYNSSASQIAASVGLSLDEASWFNTLNTFGLLIALPLGAW 64
           L I+ +AL LA   Q +   I N +   IA ++G SL + +W  T       I++PL  W
Sbjct: 12  LVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPLTGW 71

Query: 65  LASRFGYRQLFRIGAVVGLFSTLASSLC-----MQPAPQMLSWFG--HGLSASFLVLFAH 117
           LA R G  +LF       L+ST+A ++      +  +  ML +F    G+ A  L+  + 
Sbjct: 72  LAKRVGEVKLF-------LWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQ 124

Query: 118 AIILKNLNFRAIAYAESLVLLVAVLVPLGIYPYLLSILAENNLWRWSFSLQL---VPFLL 174
           +++L N      + A +L  +  ++ P+   P L   +++N  W W F + +   V  +L
Sbjct: 125 SLLLNNYPPAKRSIALALWSMTVIVAPI-CGPILGGYISDNYHWGWIFFINVPIGVAVVL 183

Query: 175 MLSWARFGHWPHLEETQEIGFNWLQALLLTIASCGIAYILLRGERFDWFETPSIIWITLI 234
           M      G     E  +    + +   LL I    +  +L RG+  DWF +  II +T++
Sbjct: 184 MTLQTLRGRETRTERRR---IDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVV 240

Query: 235 TASAITLLGLAIKNRRGRGQYLDASVLASRIGKLSMLQAAIAGFVVLAISMLTSVYMTKI 294
              AI    L +         +D S+  SR   +  L  ++A  +     +L    + ++
Sbjct: 241 AVVAICF--LIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEV 298

Query: 295 MQYSAANAGYINL-IGFVGMLAGLGVALFATCNPDRNPFKVVPIGIIMMIATCIW--LTG 351
             Y+A  AG  +  +G + ++    +  FA     R   ++V    IM      W   T 
Sbjct: 299 YGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR---RLVTFSFIMYAVCFYWRAYTF 355

Query: 352 SNALIGQAYLWPAILLKGFAIGILNITLTIHILRSLPRQHLLETIAWFYLFRNLGSLSAI 411
              +   A  WP   ++GFA+    + LT   L  LP + L    +     R L      
Sbjct: 356 EPGMDFGASAWPQ-FIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGT 414

Query: 412 GEFSRFMTIETSNAMQKLAENYDPLNETFIHHQQLITASLQQSTLAPTPERSALLLMSQL 471
              +   T   S    +L E+ +P N     + Q + + L+   L  T ++++  +  Q+
Sbjct: 415 SITTTMWTNRESMHHAQLTESVNPFNP----NAQAMYSQLE--GLGMTQQQASGWIAQQI 468

Query: 472 KTQALSVAGVNNYQWLIATTLIIIPSMV 499
             Q L +   N   W+ A   +++  +V
Sbjct: 469 TNQGL-IISANEIFWMSAGIFLVLLGLV 495