Pairwise Alignments

Query, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 610 a.a., Putative multidrug export ATP-binding/permease protein from Pseudomonas sp. DMC3

 Score =  655 bits (1691), Expect = 0.0
 Identities = 328/611 (53%), Positives = 442/611 (72%), Gaps = 4/611 (0%)

Query: 1   MFKRFESWVSALPDQEAVQPPRGIYRFCRHYTRGFELPLALMSILTALLAILEVSLFAFM 60
           +++RFE  +    D     PP  ++ F  +Y +      A + ++    +++EV+LF+++
Sbjct: 2   LYRRFEQLIDIFRDAPTASPPDRVWPFYVYYLKQVWPSFAALLVIGLFASLIEVALFSYL 61

Query: 61  GDLVDLLASHSPETLFAEQGDKLLLMAVLVLVVIPVLVLLHALVIYQGLLGNYPMSIRWL 120
             ++DL         F++   +L  M V+ LV+ P+   LH L+++Q L       IRW 
Sbjct: 62  SRIIDLAQGTPNPNFFSDHALELTWMLVVALVLRPIFFALHDLLVHQTLSPGMTSMIRWQ 121

Query: 121 AHRYLLKQSIAFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFLSMLVIIADA 180
            H Y+LKQS+ F+QNDFAGRIA ++MQT  ++R++  + +D L ++++Y +S LV+ A+A
Sbjct: 122 NHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVQAVDALWHVVIYAISSLVLFAEA 181

Query: 181 DLRLMLPMLVWLMIYVGLQFYYLPKLKQVSTEQADARSTMTGRIVDSYTNIATVKLFSHT 240
           D RLM+P+L W++ Y+G  +Y++P++K+ S E +DARS + GRIVD YTNIAT+KLF+HT
Sbjct: 182 DWRLMIPLLTWIVAYIGALYYFVPRVKERSVEASDARSKLMGRIVDGYTNIATLKLFAHT 241

Query: 241 QKEAQYAKESMTGFLDTVYRQM--RLVTGINVSVQVINYLLAFSVAAVSIWLWRDNAITI 298
             E  YAKE++     TV  QM  R+VT ++V++  +N LL     A+++WLW  + IT+
Sbjct: 242 NFEQHYAKEAIEE--QTVKAQMAGRVVTSMDVAITTMNGLLIVGTTALALWLWTQSLITV 299

Query: 299 GAIAVAVSLSLRLNGMSQWIMWEISSLFENIGTVADGMNTLSRPTSVQDSDNASQLTVSK 358
           GAIA+A  L +R+  MS WIMW ++ +FENIG V DG+ T+S+P SV D + A  L V+ 
Sbjct: 300 GAIALATGLVIRIVNMSGWIMWVVTGIFENIGMVQDGLRTISQPVSVTDREQAKPLAVAS 359

Query: 359 GEIAFNRVSFHYGEASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSI 418
           GE+ F  V FHYG+  G+I DL+L IKPGEK+GL+G SGAGKSTLVNLL+R +DVE G I
Sbjct: 360 GEVRFEHVDFHYGKKRGIIGDLNLTIKPGEKIGLIGPSGAGKSTLVNLLLRLYDVEGGRI 419

Query: 419 TIDGQNIREVEQDSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYE 478
            IDGQNI EV Q+SLRA IGM+TQDTSLLHRSIRDN+ YGKPDA++ EL  A+ +A+A E
Sbjct: 420 LIDGQNIAEVGQESLRARIGMITQDTSLLHRSIRDNLLYGKPDATDAELWEAVHKARADE 479

Query: 479 FIQGLSDPEGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIE 538
           FI  LSD EG  G DA VGERGVKLSGGQRQRIAIARVLLK+APIL++DEATSALDSE+E
Sbjct: 480 FIPLLSDAEGRSGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVE 539

Query: 539 AAIQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGKIVEQGTHQELIKQGGIYAQLW 598
           AAIQESL  LM+GKTVIAIAHRLSTIA MDRL+VL+ GKI E GTH EL+   G+YA+LW
Sbjct: 540 AAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLENGKIAESGTHAELLAHRGLYARLW 599

Query: 599 AHQTGGFLGIE 609
           AHQTGGF+GI+
Sbjct: 600 AHQTGGFVGID 610