Pairwise Alignments

Query, 336 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) from Shewanella loihica PV-4

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score =  127 bits (320), Expect = 3e-34
 Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 2/325 (0%)

Query: 13  IVKMTSIAALLGASLNSWAAPTEIKFSHVVAENTPKGQMALKFKQLVEERLPGEYQVNVF 72
           +  + + A L  + + +      +KF+       P+   A KF  LV  +  G+ +V +F
Sbjct: 12  VATVAATAVLAASGVAAQVKERTLKFAFQNQTGHPQALGAQKFADLVAAKSDGKMKVKLF 71

Query: 73  PNSQLFGDNNELSALLLNDVQFVAPSLSKFERYTKKLQLFDLPFLFKDMDAVNRFQQSDA 132
               L GD   +SAL    ++    +        K+   +D PFLF D    +       
Sbjct: 72  AGGVLGGDLQTVSALQGGTIELTVLNAGILSAQVKEFAAYDFPFLFNDGKEADAVTDGPF 131

Query: 133 GQQLLNSMKRKGVVGLGYLHNGMKQFSASS-PLVLPEDAQGKKFRIMASDVLAAQFQAVE 191
           GQ+L+  ++ KG+ GLGY   G +  + S  P+   +D  G K R++ S +    F A+ 
Sbjct: 132 GQKLMAKLEDKGLYGLGYWDLGFRNLTNSRRPITRADDITGLKIRVIQSPIYIDVFSALG 191

Query: 192 AIPVKKPFSEVFTLLQTRAIDGQENTWSNIYSKKFYEVQSNITESNHGVLDYMVVTSNTF 251
           A     PF E++  L+ +A+DGQEN  + I S KF EVQ  IT++ H      ++ S   
Sbjct: 192 ANATPLPFPELYPALEQKAVDGQENPNTTILSSKFSEVQKYITQTRHIYNPQALLISKKT 251

Query: 252 WKSLPADKRKVIKASLDEAIAYGNEIAAAKVNKDKQAIIDSKRSEVTYLTPEQRAAWVNA 311
           W S+ A+++K++  + +EA  +    +    +    A+  +  + V+ ++PE+       
Sbjct: 252 WDSMSAEEKKILTQASNEATVFQRAASRGAADGALDALKKAGMT-VSEISPEEMTKLRAK 310

Query: 312 MKPVWAQFEDKIGKDLIDAAVASNE 336
           +KPV  ++   +G   +   +A  E
Sbjct: 311 VKPVIDKYAASVGDTTVKELMAEVE 335