Pairwise Alignments

Query, 212 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) from Shewanella loihica PV-4

Subject, 157 a.a., 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 48.1 bits (113), Expect = 9e-11
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 11  EVVLNALITAMTLLVFVEVIARFFFNTGFLWIQELTLTICGWFVLFGMSYGVKVGAHIGV 70
           E +L  LI  ++ +VF+ VI R+ F +  L + EL+  +  W    G        AH+ V
Sbjct: 6   EGILAVLIAVLSCIVFINVILRYGFESSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQV 65

Query: 71  DAFVKKLPAQGRKYTAILAVAICLIYCGMFLVGSWDYLAKMYQ 113
              V+KL    ++  ++L  ++ L+ C   +   W  L K  Q
Sbjct: 66  TFVVEKLSPANQRRLSLLTHSLILLLC---IALGWGSLQKALQ 105