Pairwise Alignments

Query, 212 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) from Shewanella loihica PV-4

Subject, 157 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score = 48.1 bits (113), Expect = 9e-11
 Identities = 25/96 (26%), Positives = 45/96 (46%)

Query: 9   IEEVVLNALITAMTLLVFVEVIARFFFNTGFLWIQELTLTICGWFVLFGMSYGVKVGAHI 68
           I E +L   +  ++ +VF+ +I R+ F T  L + EL+  +  W    G        AH+
Sbjct: 4   ILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYLFVWLTFIGAIVAFMDNAHV 63

Query: 69  GVDAFVKKLPAQGRKYTAILAVAICLIYCGMFLVGS 104
            V   V+KL    ++  A++  ++ L  CG    G+
Sbjct: 64  QVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGA 99