Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 635 a.a., ATP-binding region, ATPase-like:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  281 bits (719), Expect = 6e-80
 Identities = 182/613 (29%), Positives = 322/613 (52%), Gaps = 51/613 (8%)

Query: 19  IILLGLAFTLRVAYWFHLEHGYEMTRQQSNAQMKELLSFLSGSLSRYESIPHVLSTNPLL 78
           ++++GL +   +AY      G +  R+    Q++     +   +S+Y  +P VL     +
Sbjct: 33  MLMIGLGY---IAYLVSEHSGIKSLRETGERQLELHARTVESEISKYTYLPSVLELESSV 89

Query: 79  ASALLKQDDPDTITPLNRYLEEIQSITEALDIYLVNIDGDAIAASNWQQSYSFIGKNYAF 138
            S LL +  P+    +NRYLE +   + +  IY+++  G  +A SNW+ + S+ G++ +F
Sbjct: 90  -SQLLNEPGPELQQQVNRYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSF 148

Query: 139 RPYFKDAIEGKMGRYFAVGTSSNKRGYYFSYPIYSHGYPVTPSQGEAKVLGAIVVKVDVT 198
           R YF+DA+ G  GR++ +GT++ + GYY ++ +   G          +++G  V+KV + 
Sbjct: 149 RAYFQDAVRGLPGRFYGIGTTTGESGYYLAHGLEDKG----------RIIGVAVIKVRLE 198

Query: 199 EIEQQSTGMARGSNYEFAISDPDHIIFLSSRPEWRLTALTPVTHQLKQRIESSRRY---A 255
            +E++     + +  E  +SD + II LSS P  RL ++ P+T ++K+R+  S +Y    
Sbjct: 199 ALEERW----QRARLEAFVSDENGIIILSSDPARRLKSVRPLTAEVKERLARSLQYYWWP 254

Query: 256 NREISPLAIEP--PFAPSLAADYQIYQIGDDKRGAEFMDNAAYMSDAGWQVHILSPMTPI 313
             E+ PL  E       +L     I  +  + +   ++  +  +SD  W + +L+P+  +
Sbjct: 255 LNELVPLERETLSEGVETLVFPANI-SVDREHKKVSYLAQSRPLSDTAWHLTLLTPLENL 313

Query: 314 YRSLPPLLLLYGALYLLCALALLFAIEKRK--NTR-----RMQQAHEQLEQRVKERTQAL 366
            R      +L      L    L+   E+RK  +TR      +Q A+ +LE+++ ERT+ L
Sbjct: 314 RREAANQGMLVAVACALVTFLLIAWNERRKVISTRLAAREALQAANNELERKIAERTEHL 373

Query: 367 ETSHQQLK--------------EAQDELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQ 412
             S+++LK              +AQDEL+QA KL  IG +S SI HE+NQPLAA+R+ + 
Sbjct: 374 RASNERLKAQIRERRQAEDTLRKAQDELVQAGKLAAIGQMSTSIAHELNQPLAALRTLSG 433

Query: 413 NTQTLLSRAKWDDVSSNIMTIIELTDRLAAIVSQFKSFTRKSQGNDKAISVAQCIRDALT 472
           NT   L R   D  S+N+ TI +L DR+  I +  ++F R+     +A  +++ +  A+ 
Sbjct: 434 NTVRFLERGALDTASTNLRTINDLVDRMGRITASLRAFARRGDDQGQA-QLSKAVDAAMQ 492

Query: 473 IVQPEVDKQGIDLVLNNTECQTLLWGDPIRLQQVLINLMSNAMVAM-RANNPKQLIIGVV 531
           ++   V++ G  L L+       L  D  RL+Q+L+NL+ NA+ AM     P+  + G V
Sbjct: 493 LLGVRVEQSG--LTLHRDFVDATLTIDQTRLEQILVNLIGNALDAMFDLQQPELWLTGSV 550

Query: 532 VSNRLEITIEDTGTGIDESQMQKIFDPYYTS--SRQGLGLGLSISRRIVEAMQGKISVAN 589
           +  R  + + D G G+D    + +F+P++T+    QGLGLGL++S  +  A  G +S  +
Sbjct: 551 IDGRYRLRVRDNGHGVDADARKHLFEPFFTTKPGEQGLGLGLTLSASLAAAAGGSLSAEH 610

Query: 590 RQQGGAIFQITLP 602
            Q GG  F ++LP
Sbjct: 611 PQDGGTTFVLSLP 623