Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 622 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Pseudomonas sp. S08-1

 Score =  251 bits (641), Expect = 6e-71
 Identities = 178/619 (28%), Positives = 313/619 (50%), Gaps = 60/619 (9%)

Query: 19  IILLGLAFTLRVAY-WFHLEH--GYEMTRQQSNAQMKELLSFLSGSLSRYESIPHVLSTN 75
           + LLG+A  L   Y  + L    G          Q++     +   + +Y  +P +L   
Sbjct: 24  LTLLGIALVLGCGYAGYRLSEAIGIRELAAGGERQLELNARAVESEIGKYTYLPSLLELE 83

Query: 76  PLLASALLKQDDPDTITPLNRYLEEIQSITEALDIYLVNIDGDAIAASNWQQSYSFIGKN 135
             ++  LL          LN +LE +     +L +Y++++DG  +A SNW Q  SF+G++
Sbjct: 84  SGVSRLLLTPGSYRR-QRLNDHLEGLNQRAGSLAVYVLDLDGRVVATSNWNQPSSFLGED 142

Query: 136 YAFRPYFKDAIEGKMGRYFAVGTSSNKRGYYFSYPIYSHGYPVTPSQGEAKVLGAIVVKV 195
            +FR Y+K A+ G+ GR++ VG+++ + GYY ++ + ++G          +V+G  VVKV
Sbjct: 143 LSFRDYYKQAVRGEPGRFYGVGSTTGEPGYYLAHGLRANG----------RVIGVAVVKV 192

Query: 196 DVTEIEQQSTGMARGSNYEFAISDPDHIIFLSSRPEWRLTALTPVTHQLKQRIESSRRY- 254
            +  +E++       +  E  +SD + II LSS P  RL A+ P+    ++R+  S +Y 
Sbjct: 193 RLDALEKRWAD----ARVEAYVSDENGIIILSSDPTRRLKAVRPLDDADRERLARSLQYH 248

Query: 255 --ANREISPLAIEPPFAPSLAADYQIYQI-GDDKRGAEFMDNAAYMSDAGWQVHILSPMT 311
               +E+ PLA     +  L    Q  ++ G   +  +++     ++D  W + +L+P+ 
Sbjct: 249 WATLQELQPLA-----SRELGDGLQEVRLDGPAGQPLDYLQQTRALNDTAWHLTLLTPLA 303

Query: 312 PIYRSLPPLLLLYGALYLLCALALL--FAIEKRKNT--------RRMQQAHEQLEQRVKE 361
              R+     LL G   ++CAL +    A+ +R+            +Q+A+ +LE+++ E
Sbjct: 304 EQRRTAASHGLLAG---VVCALLIFGGLALNQRRKVIATRLAAREALQRANGELERKIAE 360

Query: 362 RTQALETSH--------------QQLKEAQDELIQAAKLTVIGSLSASINHEINQPLAAI 407
           RT  L  S+                L++AQD L+QA KL VIG +S SI HE+NQPLAA+
Sbjct: 361 RTLDLSASNLLLQAEVRERQQTEANLRQAQDGLVQAGKLAVIGQMSTSIAHELNQPLAAL 420

Query: 408 RSYAQNTQTLLSRAKWDDVSSNIMTIIELTDRLAAIVSQFKSFTRKSQGNDKAISVAQCI 467
           R+ + N    L R   D   SN+  I EL DR+  I    ++F R+  G+    S+ Q +
Sbjct: 421 RTLSANAARFLERGALDTAGSNLQAIGELVDRMGRITGSLRAFARRG-GDHGQASLEQAV 479

Query: 468 RDALTIVQPEVDKQGIDLVLNNTECQTLLWGDPIRLQQVLINLMSNAMVAMRANNPKQL- 526
             AL ++   V+++   L     E +  +  D  RL+Q+L+NL+SNA+ A+R    ++L 
Sbjct: 480 EAALFLLHSRVEQERPTLHREFAEARLAI--DQTRLEQILVNLLSNALDALREQPRRELW 537

Query: 527 IIGVVVSNRLEITIEDTGTGIDESQMQKIFDPYYTS--SRQGLGLGLSISRRIVEAMQGK 584
           + G        + + D+G GI       +F+P++T+    +GLGLGL++S  +  A  G 
Sbjct: 538 LSGAQHGASYRLEVRDSGAGIPPDVRVHLFEPFFTTKPGEKGLGLGLTLSASLAAAAGGS 597

Query: 585 ISVANRQQGGAIFQITLPI 603
           + V + ++GG+ F + LP+
Sbjct: 598 LVVRHPEEGGSAFILDLPL 616