Pairwise Alignments

Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4

Subject, 379 a.a., Periplasmic protein involved in polysaccharide export from Enterobacter asburiae PDN3

 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 51/206 (24%), Positives = 106/206 (51%), Gaps = 15/206 (7%)

Query: 139 EYLVGPGDRIKVQLFG-----------KENKEYDLVINREGSIQFPELGPISVAGLSFAE 187
           +Y VGPGD I V ++            + + +    +  +G++ +P +G + VAG + AE
Sbjct: 84  QYRVGPGDVINVTVWDHPELTTPAGQYRSSSDTGNWVQSDGTMFYPYIGKVHVAGKTLAE 143

Query: 188 LRESLSHRISQQMIGIESNITMGELRSIRIFIAGDAYKPGSYTVSSLS-TITQALFVAGG 246
           +R  ++ R++Q +   + ++ +   RS + +I+G   K G   ++++  T+  A+  AGG
Sbjct: 144 IRSDITGRLAQYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGG 203

Query: 247 VNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGDASGDIRLRSGDVVFIPPVGGL-VSITGE 305
           + +    RN+ +  NGK    + L  L+  GD + +  L  GD++++P    L V + GE
Sbjct: 204 LTDGADWRNVVLTHNGK-EQRISLQALMQNGDLTQNRLLYPGDILYVPRNDDLKVFVMGE 262

Query: 306 VRRPAIYELK-RNETVADIVAMAAGV 330
           V++ +  ++     T+ + +  A G+
Sbjct: 263 VKKQSTLKMDFSGMTLTEALGNAEGI 288



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 588 TQVVAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGLVEGAYTARAELTTTVIGSEESSVNH 646
           +Q   ISG+V   G   ++     V D + AAGGL +GA      LT    G E+     
Sbjct: 170 SQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDGADWRNVVLTHN--GKEQ----- 222

Query: 647 SSVNLDDALAGID-SANVVLSSRDILTVMTTPDWQENKAVEIRGEVKFPGMYNIR-RGET 704
             ++L   +   D + N +L   DIL V    D +    V + GEVK      +   G T
Sbjct: 223 -RISLQALMQNGDLTQNRLLYPGDILYVPRNDDLK----VFVMGEVKKQSTLKMDFSGMT 277

Query: 705 LADVIDRAGGFTQYAYLPSSVFV 727
           L + +  A G        + +FV
Sbjct: 278 LTEALGNAEGIDLTTSNATGIFV 300