Pairwise Alignments

Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4

Subject, 379 a.a., Periplasmic protein involved in polysaccharide export from Enterobacter asburiae PDN3

 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 53/206 (25%), Positives = 110/206 (53%), Gaps = 15/206 (7%)

Query: 139 EYLVGPGDRIKVQLF---------GKENKEYDLV--INREGSIQFPELGPISVAGLSFAE 187
           EY +G GD + V ++         G+     D    +N +G++ +P +G + VAG + ++
Sbjct: 83  EYRIGTGDILTVTVWDHPELTTPAGQYRSASDAGNWVNADGTLFYPYVGKLQVAGKTVSQ 142

Query: 188 LRESLSHRISQQMIGIESNITMGELRSIRIFIAGDAYKPGSYTVSSLS-TITQALFVAGG 246
           +RE ++ R+ + +   + ++++   RS + ++ G+  K G   ++++  T+  A+  AGG
Sbjct: 143 VREEITARLDKVIESPQVDVSIAAFRSQKAYVTGEVEKSGQQPITNIPLTVMDAVNAAGG 202

Query: 247 VNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGDASGDIRLRSGDVVFIPPVGGL-VSITGE 305
           ++     RN+ +  +GK    + LY L+  GD + +  L  GD++FIP    L V + GE
Sbjct: 203 LSADADWRNVVLTHDGK-DSRLSLYTLMQHGDLTQNKLLYPGDILFIPRNDALKVFVMGE 261

Query: 306 VRRPAIYELKRN-ETVADIVAMAAGV 330
           V + +  ++ R+  T+A+ +  A G+
Sbjct: 262 VVKQSTLKMDRSGMTLAEALGNAGGL 287



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 59/225 (26%), Positives = 86/225 (38%), Gaps = 54/225 (24%)

Query: 588 TQVVAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGLVEGAYTARAELTTTVIGSEESSVNH 646
           +Q   ++G+V   G  P++     V D V AAGGL     +A A+    V+  +      
Sbjct: 169 SQKAYVTGEVEKSGQQPITNIPLTVMDAVNAAGGL-----SADADWRNVVLTHDGKDSRL 223

Query: 647 SSVNLDDALAGIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEV-KFPGMYNIRRGETL 705
           S   L     G  + N +L   DIL +       +   V + GEV K   +   R G TL
Sbjct: 224 SLYTLMQH--GDLTQNKLLYPGDILFIPRN----DALKVFVMGEVVKQSTLKMDRSGMTL 277

Query: 706 ADVIDRAGGFTQYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYS 765
           A+ +  AGG  Q     + +FV                         R +SK G      
Sbjct: 278 AEALGNAGGLNQNMADATGIFV------------------------IRQISKKG------ 307

Query: 766 DAKMMLTDLENIKAVGRL-VVDLSAISIGIEQADIQLEDQDILYV 809
                  D + I  + +L   D SA+ +G E    QLE  DI+YV
Sbjct: 308 -------DTDKIANIYQLNAEDASAMVLGTE---FQLEPYDIVYV 342



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 8/127 (6%)

Query: 563 GSMNRSELLYPVVAQLAAQGNSDKGTQVVAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGL 621
           G + +++LLYP       + ++ K    V + G+V       + + G  + + +  AGGL
Sbjct: 232 GDLTQNKLLYPGDILFIPRNDALK----VFVMGEVVKQSTLKMDRSGMTLAEALGNAGGL 287

Query: 622 VEGAYTARAELTTTVI---GSEESSVNHSSVNLDDALAGIDSANVVLSSRDILTVMTTPD 678
            +    A        I   G  +   N   +N +DA A +      L   DI+ V T P 
Sbjct: 288 NQNMADATGIFVIRQISKKGDTDKIANIYQLNAEDASAMVLGTEFQLEPYDIVYVTTAPL 347

Query: 679 WQENKAV 685
            + N+ +
Sbjct: 348 SRWNRVI 354