Pairwise Alignments

Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4

Subject, 861 a.a., Periplasmic protein involved in polysaccharide export from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  246 bits (628), Expect = 4e-69
 Identities = 229/924 (24%), Positives = 398/924 (43%), Gaps = 118/924 (12%)

Query: 12  AVAALFLVGTQVQAITPS--PQMIEQFKNLPASEQQRLARQYGIDPAMLGGASVSQQNLD 69
           A  A  +   + Q I+ S  P + E+ + +PA E  +LA +       L  A VS    +
Sbjct: 40  AQIATIVQKAEEQGISKSQIPALAEE-RGMPAMEASKLATRIN----QLNSAGVSADEAN 94

Query: 70  NPQVVQPRVNDQFSQPRATNDVVDHSRDAANELNFSQDEQKKQLARFGYELFQGEPTTFA 129
           +  + Q          R   D     RD +   + S++E+K     FGY LF  +   F+
Sbjct: 95  SGTMAQ----------RQLTDTARIGRDRSEADSLSEEEKKI----FGYGLFHNKKLNFS 140

Query: 130 PVSDVPVPGEYLVGPGDRIKVQLFGKENKEYDLVINREGSIQFPELGPISVAGLSFAELR 189
           P  ++P P  Y++G GD++ + ++G   + YDL +N EG +  P +GPI+V G +     
Sbjct: 141 PNLNIPTPQSYVIGTGDQLLIDIYGDSQQSYDLSVNPEGRVYIPNVGPINVGGSTIQAAT 200

Query: 190 ESLSHRISQQMIGIESN-------ITMGELRSIRIFIAGDAYKPGSYTVSSLSTITQALF 242
             +   +S     + S+       I +G +RSI++ + G+   PG YT+ S +++  AL+
Sbjct: 201 ARIKRELSSIYADLNSSNPRTFMQIRLGNIRSIQVAMVGELQNPGDYTLPSFASVFNALY 260

Query: 243 VAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGDASGDIRLRSGDVVFIPPVGGLVSI 302
            AGG N  GS RNI+V R+ + +  +D+Y+ LM G+   ++RL+  DV+ +P V   V +
Sbjct: 261 AAGGPNRQGSFRNIRVFRDSRQIAEVDVYEFLMNGNQQQNVRLQDNDVIMVPAVETRVEV 320

Query: 303 TGEVRRPAIYELKRNETVADIVAMAAGVKPGAYPKSSSIERYNSNGLRSIVNVDLTSTQG 362
            G VRR  ++E++ +E + D++  A G K  AY    ++ R  S+  R +   D++    
Sbjct: 321 QGPVRREGLFEIQADEDINDLIRYAGGFKSEAYTGRVAVRRV-SDQAREV--ADVSKEAF 377

Query: 363 KSTKAQAGDFIRVKNASGQFEDAITVVGAVVRPGKYQWFDGQKVSDLLPSLWGDLSISAD 422
            S K + GD   +     +FE+ + + GAV  PG++  F+G  V DL+    G L   A 
Sbjct: 378 GSFKVKDGDIFLIGKKLERFENRVQISGAVFHPGEFALFEGMTVKDLIDKAEG-LRGEAF 436

Query: 423 LNYAIIVREVNRYGKVKVLQFSPSRAIAEKDVTQDLLLAPRDKVMLFNYSDDTQNRYELN 482
           LN A + R      +   L+  P       + T   ++  R+ V+      D +  Y + 
Sbjct: 437 LNRATLYRT----QQDMTLEIVPVDVKGVVNGTAQDIILQREDVLHIPSKYDLKEEYYVK 492

Query: 483 KLVKHRVKKVTSLT-GDSLVGNDL-FKAGFSQLDKMQLSQRSQIGGVVVAKEAPDDKEQL 540
             +   V +  +    D++   DL  KAG               G    A +A  +  + 
Sbjct: 493 --ISGEVNRPGAFAFADNMTVEDLVLKAG---------------GFKESASDAYIEVARR 535

Query: 541 VKGEVNKMLANLFE---DKELIKLSGSMNRSELLYPVVAQLAAQGNSDKGTQVVAISGKV 597
           VK   N  +A +F    D+ L   SG  +   +L P    +  +    +  ++V + G+V
Sbjct: 536 VKDRTNGQIAEIFTIDIDENLEIDSG--DEEVVLEPFDHIIIRRSPGFQREKMVRVEGEV 593

Query: 598 RHPGVYPLS-QGAKVKDLVIAAGGLVEGAYTARAELTTTVIGSEESSVNHSSVNLDDALA 656
            +PG Y +S    ++ DL+  AGG+ + AY   A+L          S N           
Sbjct: 594 NYPGQYTISTANERISDLLKRAGGMNQFAYAKGAKLIRRTEYFVPKSDNE---------- 643

Query: 657 GIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEVKFPGMYNIRRGETLADVIDRAGGFT 716
                   + S ++  V      +E K  E   EV      + +       + D+ G  +
Sbjct: 644 --------VRSENLREVKENLVKEEGKNTE--AEVNMLNRIDKK-------INDKGGDIS 686

Query: 717 QYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNYSDAKMMLTDLEN 776
               L +  F  E V    Q +  + A                  V +   +M+  DL  
Sbjct: 687 NQKGLAADEFRAERVTDVSQSDSTRAAK-----------------VEFKTQEMVGIDL-- 727

Query: 777 IKAVGRLVVDLSAISIGIEQADIQLEDQDILYVPSVKQTIAVMGEVQHAATHRFKEGLTL 836
           +K +     D   I   +++ DI       L +P   QTI + GEV    + RF+ G + 
Sbjct: 728 LKILENPGSDQDLI---LQEGDI-------LSIPKELQTIRMRGEVLFPTSARFESGKSF 777

Query: 837 DQYLEMSGGARERADEDRTYIIKANGSVLLPNRSMWFSSNTELNPGDTIIVPLDTEYKD- 895
             Y+  +GG  + A + ++Y+I ANG V      ++F    ++ PG  IIVP   E +  
Sbjct: 778 KGYISKAGGFTDNARKGKSYVIYANGDVKRTKNFIFFKDYPKMEPGAEIIVPEKPEREPM 837

Query: 896 NLTLWTQVTGIIYNSAVALATIAK 919
           + T W  +   +    + +  +A+
Sbjct: 838 SATNWIGLASSLATLGILIDRLAE 861