Pairwise Alignments

Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4

Subject, 869 a.a., Periplasmic protein involved in polysaccharide export from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  216 bits (550), Expect = 5e-60
 Identities = 194/794 (24%), Positives = 350/794 (44%), Gaps = 103/794 (12%)

Query: 108 EQKKQLARFGYELF--QGEPTTFAPVSDVPVPGEYLVGPGDRIKVQLFGKENKEYDLVIN 165
           E+K   + FG +LF  +    TF P  ++  P  Y++GPGD + V ++G     Y+  I 
Sbjct: 128 EEKNNPSYFGLDLFYQKERELTFEPNLNMATPSSYVLGPGDLLYVDVYGASENYYESTIT 187

Query: 166 REGSIQFPELGPISVAGLSFAELRESLSHRISQQMIGIESN-------ITMGELRSIRIF 218
            EG++    +GPI ++GLS +E  + + +R+S+    ++ +       +++G +RSI++ 
Sbjct: 188 PEGNLILENIGPIGLSGLSISEATKVVKNRLSRFYADMQGDNPSTFMQLSLGNVRSIKVH 247

Query: 219 IAGDAYKPGSYTVSSLSTITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGD 278
           + G+   PG++T+S+ ST+  AL+ AGG N  G++RNI+V RN + V ++D YD L+ G 
Sbjct: 248 LVGELRLPGTFTLSAFSTVFNALYAAGGPNTNGTMRNIKVFRNNQQVATVDAYDFLVNGK 307

Query: 279 ASGDIRLRSGDVVFIPPVGGLVSITGEVRRPAIYELKRNETVADIVAMAAGVKPGAYPKS 338
           A+   +L+  DV+ + P    V++ G V+RP  +E++  ET  D++A A G    AY   
Sbjct: 308 ANMGFQLQDQDVIMVEPYASRVTLRGAVKRPMTFEVQPGETFEDVLAFAGGFTDNAYTNK 367

Query: 339 SSIERYNSNGLRSIVNVDLTSTQGKSTKAQAGDFIRVKNASGQFEDAITVVGAVVRPGKY 398
            S+ R+     +     D+ + Q      +AGD   +     ++ + + + GAV R G Y
Sbjct: 368 VSVTRFTQ---KEKTVSDIYNGQFGIFTVKAGDEYTIGTVLNRYNNRVQLKGAVFRAGNY 424

Query: 399 QWFDGQKVSDLLPSLWGDLSISADLNYAIIVREVNRYGKVKVLQFSPSRAIAEKDVTQDL 458
              +G  +S L+    G L   A L+ A I+R         +     +    ++DV+ + 
Sbjct: 425 ALSEGLTLSQLITRADG-LRGDAYLDRASILRTHEDLSTSVIPVNLKAVMAGDQDVSLE- 482

Query: 459 LLAPRDKVMLFNYSDDTQNRYELNKLVKHRVKKVTSLTGDSLVGNDLFK--AGFSQLDKM 516
                D ++  +   D ++ Y L    + R   +   + + +   DL +   GF++    
Sbjct: 483 ----ADDIIRISSIYDLKDEYYLKISGEVRDPGIYPYS-EGMTAEDLIQQAGGFTESASR 537

Query: 517 QLSQRSQIGGVVVAKEAPDDKEQLVKGEVNKMLANLFEDKELIKLSGSMNRSELLYPVVA 576
           Q         V +A+   D +E    GE+ +++    +D   I        +  L P   
Sbjct: 538 Q--------DVEIARRIQDGRE---NGEIAELIPVNLQDGLAID-----GNAISLKPYDN 581

Query: 577 QLAAQGNSDKGTQVVAISGKVRHPGVYPL-SQGAKVKDLVIAAGGLVEGAYTARAEL-TT 634
            +  +  +    ++V + G+V  PG + L     ++ D++  AGGL   AY A A L   
Sbjct: 582 LIVRRKPNFALERIVQVQGQVNAPGEFALRDTEERISDVIGRAGGLTGYAYPAGATLIRR 641

Query: 635 TVIGSEESSVNHSSVNLDDALAGIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEVKFP 694
           T   + ES       +L+  L  I S +                               P
Sbjct: 642 TEYFNTESEQYRRQKHLEKLLDRIISQD-------------------------------P 670

Query: 695 GMYNIRRGETLADVIDRAGGFTQYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRG 754
                R+ + LA    R  G T+               ++ +  I +  ++   DI+   
Sbjct: 671 SEAQARQMDRLAQETKR--GMTE---------------EERRSLIAQSREETLHDIS--- 710

Query: 755 VSKDGNVVNYSDAKMMLTDLENIKAVGRLVVDLSAISIGIEQADIQLEDQDILYVPSVKQ 814
              +G  +   + + +  DLE I        DL      +E+ D       I+ VP   Q
Sbjct: 711 -QGEGTSIKIKETEAIAIDLEAIMEQPGSKFDLI-----LEEGD-------IISVPKQLQ 757

Query: 815 TIAVMGEVQHAATHRFKEGLTLDQYLEMSGGARERADEDRTYIIKANGSVLLPNRSMWFS 874
           T+ + G+V +  T R++ G ++  Y++ +GG   RA   RTY++ ANG V      +   
Sbjct: 758 TVRMRGDVIYPTTVRYENGRSMKYYIDRAGGFDSRAKRKRTYVVYANGEVARTKSFLGLK 817

Query: 875 SNTELNPGDTIIVP 888
           S  ++ PG  +IVP
Sbjct: 818 SYPKVAPGSEVIVP 831