Pairwise Alignments

Query, 175 a.a., NusG antitermination factor (RefSeq) from Shewanella loihica PV-4

Subject, 162 a.a., transcription/translation regulatory transformer protein RfaH from Dickeya dianthicola ME23

 Score = 84.0 bits (206), Expect = 1e-21
 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 13/173 (7%)

Query: 1   MKSWYLVYCKPRGETRAQQNLALQQIETYLPTLPQQITKSGKNSVKRLPLFPCYLFIYFD 60
           M++WYL+YCK     RA+++L  Q++    P +  +    GK +    PLFP YLF+ FD
Sbjct: 1   MRAWYLLYCKRGQLLRAKEHLERQEVVCLSPMIALEKIVRGKRTEVSEPLFPNYLFVEFD 60

Query: 61  PLEISVSKIHSTRGVSRIIGCREEMTAIDDAIVHSIRMREAKLLNALQLPSDDLLSGNAE 120
           P  I  + I STRGVS  +        +   ++  ++     +    + P          
Sbjct: 61  PEHIHTTTISSTRGVSHFVRFGNLPALVPQQVIDDLQQHPCAMHIDPETPQP-------- 112

Query: 121 PRLSVGDKVKFVEGPFKELEGIFEEQSGDKRCHILFEIMGQQKRVSVSRVSIK 173
                GD+V   EG F  L+ I+ E  G+ R  +L  ++ +Q R S+  +  +
Sbjct: 113 -----GDEVTITEGVFSGLQAIYTEPDGEARSMLLLNLLNKQVRQSIDNLQFR 160