Pairwise Alignments

Query, 329 a.a., CheW protein (RefSeq) from Shewanella loihica PV-4

Subject, 313 a.a., CheW domain protein from Pseudomonas fluorescens GW456-L13

 Score =  133 bits (334), Expect = 7e-36
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 39/263 (14%)

Query: 62  PRPVVTQATPTPLNKL-ALEQLLAPVSEIATQTETQTASKVELKTLDTKPASVETMTQAV 120
           P PVVT     P+  + A   +LAPVS IA                   P     + QA+
Sbjct: 69  PAPVVTPVAKAPVAVVEAPAPMLAPVSTIA-------------------PLLQALVPQAI 109

Query: 121 SVQTKSESQVKQKIEEKLETSASIKQEEIVTEKVDLAAAPQTQTGATPPGVTEALVEQLD 180
            VQ   E  V +              + +V   V++   P   +   PP  T+       
Sbjct: 110 EVQPAPEPAVVEV------------PQALVPPVVEVHLPP---SNTPPPVETDGRPSWAA 154

Query: 181 DEFQVLFFKVAGLTLAVPLVSLGGIVKV--ERINHIMGRPAWYLGVQTHRDSQLNIVDSG 238
           + F+ L F VAGLTLAVPLV LG I  +    +  + G+P W+LG+   +   L ++D+ 
Sbjct: 155 EPFECLLFDVAGLTLAVPLVCLGSIYSLAGHELTPLFGQPEWFLGILPSQAGNLKVLDTA 214

Query: 239 AWVMPEKYDDKLAQSVDYQYIVLLEDSNWGLACESLVNSVRILKSEVNWRTKAGKRPWLA 298
            WVMP++Y D   Q +  QY++ ++   WGLA   +  S+R+  +E+ WR+  G+RPWLA
Sbjct: 215 RWVMPDRYRDDFKQGL--QYVISVQGYEWGLAVHQVSRSLRLNPNEIKWRSHRGQRPWLA 272

Query: 299 GVVKEQMCGILHVQALIELLNLG 321
           G V E MC +L V +L EL+  G
Sbjct: 273 GTVIEHMCALLDVASLAELIASG 295