Pairwise Alignments

Query, 363 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase (RefSeq) from Shewanella loihica PV-4

Subject, 317 a.a., beta-ketoacyl-ACP synthase III from Escherichia coli ECRC100

 Score =  130 bits (327), Expect = 5e-35
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 17/299 (5%)

Query: 39  IYASTGIHSRRILPKHLCASDMCIAAAQRLLERLDWAPESIDVLIYVSQDADYALPATAC 98
           I   TGI  R I   +   S M   AA R +E      + I +++  +  A +A P+ AC
Sbjct: 33  IVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAAC 92

Query: 99  LMQHRLGLPQTAACLDVSLGCSGFVYATWIASQLLNSSSGKRALVLCGDTSSRHLLPDDR 158
            +Q  LG+    A  DV+  C+GF YA  +A Q + S + K ALV+  D  +R   P DR
Sbjct: 93  QIQSMLGIKGCPA-FDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDR 151

Query: 159 GTLPLFGDAGVATALEYDENWPDSYAVYGTDGTGGQHIAVKAGGRRVPTMPEREPRSTEE 218
           GT+ +FGD   A  L   E            G    H+        + T+P  +  + E 
Sbjct: 152 GTIIIFGDGAGAAVLAASEE----------PGIISTHLHADGSYGELLTLPNADRVNPEN 201

Query: 219 EERLYKDSRLYLNGAAVFSFTLRVVPKLIKETLALANIEADDLDMVVMHQANQFILEHLR 278
                    L + G  VF   +  +  ++ ETLA  N++   LD +V HQAN  I+    
Sbjct: 202 S------IHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATA 255

Query: 279 KKAKVAEEKYLIDMADFGNTSSASVPLAICHKLTNFFTNETKKVMLGGFGVGWSWGAII 337
           KK  ++ +  ++ +   GNTS+ASVP A+   + +      + V+L  FG G++WG+ +
Sbjct: 256 KKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 314