Pairwise Alignments

Query, 186 a.a., phage integrase family protein (RefSeq) from Shewanella loihica PV-4

Subject, 208 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

 Score = 45.1 bits (105), Expect = 9e-10
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 34  IGLNLALRISDLLAIKFSDIQ-----GDRLTIIEQKTGKQANIILNAKTKALIEE-IHQR 87
           I   L LR  DL  ++  D+        R  +++QKT +     +  +T+  ++  IHQ 
Sbjct: 52  IDSKLKLRACDLTKLRVRDVAHGEHVSSRAIVMQQKTQRPVQFEITEQTRLALQAWIHQA 111

Query: 88  --HPDHIYLFQSYRSQQMQHAAPKPLSRRAVTKAFAFVGEDIKVALGTHSMRKTRGYHLY 145
             H +   LF S R     H + +  +R  V      +G D     GTH+MR+T+   +Y
Sbjct: 112 QLHSEDC-LFPS-RLHASVHLSTRQYARM-VKAWIKSIGLD-PAMYGTHTMRRTKASLIY 167

Query: 146 QSCKDIGRVMRMLRHGSEAVTLRYIGI 172
           +  K++  V  +L H     T+RY+GI
Sbjct: 168 RRTKNLRAVQLLLGHTKLESTVRYLGI 194