Pairwise Alignments

Query, 734 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Shewanella loihica PV-4

Subject, 699 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase from Pectobacterium carotovorum WPP14

 Score =  414 bits (1063), Expect = e-119
 Identities = 237/671 (35%), Positives = 378/671 (56%), Gaps = 37/671 (5%)

Query: 64  ILAPLNMDIETLQAAVIFVVFDAGLMTEEQMLELFGDKLTTLVNSVVTMDAIGALKVNEQ 123
           ILA + +D ETL AA++  V +    T + M +LFG  +  LV  V  +D    LK  ++
Sbjct: 55  ILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDK---LKFRDK 111

Query: 124 SRNAEPQIDNIRKMLLAMVEDVRAVVIKLAERICLLREVKNADEETRVLLAREIADIYAP 183
               E Q +N RKM++AMV+D+R ++IKLA+R   +R + +   + R  +ARE  +IY+P
Sbjct: 112 K---EAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSP 168

Query: 184 LANRLGIGQLKWELEDISFRYLHPDTYKDIAKQLDGKRMDREIYIENFVNQLQQRLDEEQ 243
           LA+RLGI  LK ELE++ F  L+P+ Y+ I + +   R +R+  I+  +++++ RL E  
Sbjct: 169 LAHRLGIHHLKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLTEAG 228

Query: 244 IRAKVYGRPKHIYSIWKKMRGKDLTFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIP 303
           I  +V GR KH+YSI+ KM  K+  F  + D+ A R++ + L  CY  LG VH+L+   P
Sbjct: 229 IACRVSGREKHLYSIYCKMHLKEQRFHSIMDIYAFRVIVKELDTCYRVLGQVHSLYKPRP 288

Query: 304 KEFDDYVANPKPNGYQSIHTIVVGPEGKTVEIQIRTEQMHEDAELGVAAHWKYKEGTTGK 363
               DY+A PK NGYQS+HT ++GP G  VE+QIRT+ M + AE+GVAAHW YKEG +  
Sbjct: 289 GRVKDYIAIPKANGYQSLHTSLIGPHGVPVEVQIRTDDMDQMAEMGVAAHWAYKEGESST 348

Query: 364 QSGYEEKINWLRKILQWQEDVAESGNLVDEVRSQVFEDRAYVFTPNGDVVDLPMGSTVLD 423
            +    +  W++ +L+ Q+    S   ++ V+S +F D  YVFTP G +V+LP G+T +D
Sbjct: 349 TAQVRAQ-RWMQSLLELQQSAGSSFEFIESVKSDLFPDEMYVFTPEGRIVELPAGATPVD 407

Query: 424 FAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERVEIITSKHPNPKRDWLNPNLGYIKAS 483
           FAY +H+ +GH C+GA+VD +  P +  + +G+ VEIIT+    P   WLN    ++ +S
Sbjct: 408 FAYAVHTDIGHACVGARVDRQPYPLSQSLTSGQTVEIITAPGARPNAAWLN----FVVSS 463

Query: 484 RTRSKIQHWFKQQDRDKNIVAGREMLEAELAR----SGLTLKDAHSAVERFNMVGMDDLL 539
           R RSKI+   K   RD ++  GR +L   L      S +  K     +ER  +  +DDL+
Sbjct: 464 RARSKIRQMLKNLKRDDSVSLGRRLLNHALGNGRKLSDIPEKSIQLELERMKLATLDDLM 523

Query: 540 AGIGGGDVRLNQVVNHVQSRMRVNEVSEEEALEDLLKKNQARATGKGKGQVEVNGVGNLL 599
           A IG G+      ++ V ++  +NE SE               TG  K  + + G   ++
Sbjct: 524 AEIGMGN-----AMSVVVAKNLLNEQSE------------LGTTGLRK--LPIKGADGVM 564

Query: 600 SHIAKCCQPVPGDEIFGFITKGRGISVHRADCEQVKELMRVHPERSVDVVWGENYSGGYK 659
              AKCC+P+PGD I   ++ G+G+ +H   C  ++   +  PE+ + V W +     + 
Sbjct: 565 ISFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQK-EPEKFMAVEWDKVTEQEFI 623

Query: 660 LKLKVLANDRSGLLRDLTSVLAAEKSNVLAMSS-SSDVKTQTAAIEL-ELELYNLEGLSR 717
            ++KV   +  G L +LT+ + A  SN+ ++++   D +  +A I L  L+  +L  + R
Sbjct: 624 AEIKVDMFNHQGALANLTAAINAANSNIQSINTEEKDGRVYSAFIRLTTLDRVHLANIMR 683

Query: 718 VIAKLSQVAGV 728
            I  +  V  V
Sbjct: 684 KIRVMPDVIKV 694