Pairwise Alignments

Query, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 553 a.a., DNA repair protein RecN from Bacteroides stercoris CC31F

 Score =  315 bits (806), Expect = 4e-90
 Identities = 186/553 (33%), Positives = 313/553 (56%), Gaps = 5/553 (0%)

Query: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60
           ML  L I N+A++  L++DF SG + ITGETGAGKSI + A+GL LG RAD  ++R GA+
Sbjct: 1   MLRSLYIQNYALIEKLDIDFGSGFSVITGETGAGKSIILGAIGLLLGQRADVKSIRRGAA 60

Query: 61  KAEVSARFALNDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLNQMRAL 120
           K  + ARF +    + + + E+N+LE +DECILRR + + G+SRA+IN  P  L QM+ L
Sbjct: 61  KCVIEARFEIAGYGM-QPFFEENELEYEDECILRREVYASGKSRAFINDTPASLVQMKEL 119

Query: 121 GQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQQSQ 180
           G+QLI +H QH +  + K   QL++LD  A+ +  L    + ++ +K +Q++L QL    
Sbjct: 120 GEQLIDVHSQHQNLLLNKEGFQLSVLDLLAHDEDELSKYRSLHREWKQVQQDLEQLVALS 179

Query: 181 HERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYLLQDNEEG 240
            +  A +  +++Q+E+L++  L   E +E+E E   L++   +     R    + +++EG
Sbjct: 180 EKNKADEDYIRFQLEQLEDAHLATGEQEELEQEADTLSHAEEIKAGLFRAGQAM-NSDEG 238

Query: 241 AIESLLNMSLDQAQELEGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLELDPEHFAA 300
            + S+L   L+    L+   P    +   L  + I++++ S E+    +++E +P     
Sbjct: 239 GLLSVLKECLNTMAGLQKVYPAAGELAERLESSYIELKDISQEISGKEEEIEFNPARLEE 298

Query: 301 LEQRLSKIMMLARKHHVNAKD-LYQHHQALSQELSELDSDEEKLDEIAQQLESCRESFIA 359
           +  RL+ I  L +KH V+  D L       + +LS + S +E+++ +  + E+       
Sbjct: 299 VNGRLNLIYTLQQKHRVSTVDELLALADDYAAKLSNITSSDEQIETLKARSEALYNKVKR 358

Query: 360 HAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEMMSPNGCDTVEFQVTTN 419
            A  L+  R   A+E++KQ+   +  L MP  +F +++    E    +G DTV F  + N
Sbjct: 359 QAAVLTGLRTAAAREVEKQMAARLIPLGMPNVRFQVEIGTRKE-PGAHGADTVNFLFSAN 417

Query: 420 PGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGKMLRA 479
               LQ I+ VASGGE++R+ L ++ + A  V  PT++FDE+D G+SG  A  +  +++ 
Sbjct: 418 KNGALQNISSVASGGEIARVMLSVKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADIMQE 477

Query: 480 LGES-TQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSMVPLDKGQRIEELARLLGGDV 538
           +G+S  QV+ +THLPQ+A  G  H  V KQ    +T + +  L   +R+ E+A +L G  
Sbjct: 478 MGDSDRQVISITHLPQIAARGRAHYKVYKQDNETETNSHIRRLTDEERVGEIAHMLSGAT 537

Query: 539 ITNNTLANAKELL 551
           +T+  L NAK LL
Sbjct: 538 LTDAALNNAKALL 550