Pairwise Alignments

Query, 140 a.a., transmembrane pair domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 142 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 1e-17
 Identities = 31/123 (25%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 6   RILHSVLFEIFALALVVPIAIWFTGHGVGEMAAVGIGLSLYTVTWNYFYNLGFDNY-FGE 64
           ++++   +E+  L +      + +         + + ++   + WN  YN  F+ +  G+
Sbjct: 7   KLVYVTFYELIGLCMSTLGLAYLSDTQASHTGPLAVMITTIAMLWNLIYNTLFEYWESGQ 66

Query: 65  DRTKRSLKLRVVHALGFEGGLVFVTVPVVAWFLGITIWQSLMLEAVFLVVFFFYAIIFNW 124
            +  RS+  RVVHA+GF+  LV   +P++AW+L +T+ ++L+++  F+++   Y   +NW
Sbjct: 67  AKRGRSVARRVVHAIGFQLTLVVYLIPLIAWWLDMTLLEALLVDMAFIILVPCYTFAYNW 126

Query: 125 LFD 127
            FD
Sbjct: 127 AFD 129



 Score = 35.8 bits (81), Expect = 3e-07
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 2   STTERILHSVLFEIFALALVVPIAIWFTGHGVGEMAAVGIGLSLYTVTWNYFYNLGFDNY 61
           S   R++H++ F++  +  ++P+  W+    + E   V +   +    + + YN  FD  
Sbjct: 72  SVARRVVHAIGFQLTLVVYLIPLIAWWLDMTLLEALLVDMAFIILVPCYTFAYNWAFDRV 131

Query: 62  FG 63
           FG
Sbjct: 132 FG 133