Pairwise Alignments

Query, 140 a.a., transmembrane pair domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 140 a.a., transmembrane pair domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 1e-24
 Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 8/133 (6%)

Query: 5   ERILHSVLFEIFALALVVPIAIWFTGHGVGEMAAVGIGLSLYTVTWNYFYNLGFDN---Y 61
           +RI + V FE+ A+ L VP+  W T      + A+ IG+SL    WNY YNL FD    Y
Sbjct: 8   DRIRYLVGFELGAMVLAVPLGAWLTSVDSRALLALAIGMSLIAAAWNYGYNLLFDRAMLY 67

Query: 62  FGEDRTKRSLKLRVVHALGFEGGLVFVTVPVVAWFLGITIWQSLMLEAVFLVVFFFYAII 121
           F     K S+  RV H+L FE GL+F++VP++A +L I++WQ+  L+  F+V +    ++
Sbjct: 68  FKSTMVK-SMADRVWHSLLFELGLLFISVPIMAAYLSISLWQAFWLDIGFVVFY----LV 122

Query: 122 FNWLFDWARSKFY 134
           FN+ + +   KF+
Sbjct: 123 FNYCYTYLYEKFF 135



 Score = 36.6 bits (83), Expect = 2e-07
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 2   STTERILHSVLFEIFALALVVPIAIWFTGHGVGEMAAVGIGLSLYTVTWNYFYNLGFDNY 61
           S  +R+ HS+LFE+  L + VPI   +    + +   + IG  ++ + +NY Y   ++ +
Sbjct: 75  SMADRVWHSLLFELGLLFISVPIMAAYLSISLWQAFWLDIGFVVFYLVFNYCYTYLYEKF 134

Query: 62  FGEDR 66
           F   R
Sbjct: 135 FYASR 139