Pairwise Alignments

Query, 379 a.a., putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) from Shewanella loihica PV-4

Subject, 420 a.a., Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW from Variovorax sp. SCN45

 Score =  353 bits (907), Expect = e-102
 Identities = 180/384 (46%), Positives = 247/384 (64%), Gaps = 13/384 (3%)

Query: 4   LPPLSLYIHIPWCVQKCPYCDFNSHGQHGE-------LPQQEYVDDLLNDLKNDAAYVQG 56
           LPPLSLYIH+PWC++KCPYCDFNSH            +P+Q Y+D L+ DL      + G
Sbjct: 35  LPPLSLYIHLPWCLRKCPYCDFNSHEWRAASEADIDGIPEQAYIDALVADLDAALPLIWG 94

Query: 57  RSLHSIFIGGGTPSLFDASQIERLLDGVRAQIPFAPDIEITMEANPGTLEHDDFSAYCAA 116
           R++H+IFIGGGTPSLF    I+RLL  VRA++  APD EIT+EANPGT E + F AY AA
Sbjct: 95  RTVHTIFIGGGTPSLFSPQAIDRLLGDVRARLKLAPDCEITLEANPGTFERNRFRAYRAA 154

Query: 117 GVTRLSIGVQSFSSDKLNLLGRIHDKHEAEVAATKAAQAGYQSFNLDLMHGLPNQSFEEA 176
           GVTRLS+GVQSF+ + L  LGR+HD+ +A +AA + A + + +FNLDLM+ LP Q+ E  
Sbjct: 155 GVTRLSVGVQSFNDEHLKALGRVHDRAQA-IAAVEEAASAFDTFNLDLMYALPGQTLEGL 213

Query: 177 MRDIDKAAALNPPHLSWYQLTIEPNTLFHSKPPQLPDDEALWQIYEQGQQRLAALGYEQY 236
             D+ +A +L PPHLS Y LTIEPNT F   PP LP+D+  +++ ++  +R +A G  +Y
Sbjct: 214 DADLSQALSLAPPHLSVYHLTIEPNTWFAKFPPTLPEDDIAYEMLDRITERTSAAGMTRY 273

Query: 237 EISAYAKPGYQCRHNLNYWQFGDYLGIGCGAHGKITMAEDQRIYRTVKIKHPKGYL---G 293
           E+SAYA+ G+ C HN NYW+FGDYLGIG GAH K++ A   RI R V+ + P+ Y+    
Sbjct: 274 EVSAYAREGHACGHNRNYWEFGDYLGIGAGAHSKLSFA--HRIVRQVRYREPRLYMENAR 331

Query: 294 AGDYLFDKSEVLAEDRALEYLMNRLRLMSPIPKREFESRTGLSAEVLNEGMARGAAKGLV 353
           AG  +    EV   D   E+++N LRL +     +F  RTGL+   +  G+     KGL+
Sbjct: 332 AGAAVSQSDEVALADLPFEFMLNALRLKAGFTLPQFSERTGLAMTAIQRGLEEAERKGLL 391

Query: 354 IIQDEHWQLTAKGQMFVNELLGLF 377
                    T +G  F+++L  +F
Sbjct: 392 ARDLFRVWPTERGLDFLSDLQAMF 415